RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA939415", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA939415 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26708247 26708247 PRJNA939415_P_NODE_62561_length_271_cov_2.439394_g62139_i0 PRJNA939415 62561 271 2.439394 6.61075774 Sycon ciliatum 27933 Porifera other_Eukaryota 112 3.98e-27   NR XP_065197121.1 27933 g62139 i0 61.6 0.952029520295203 86 31 94.1 2 2 256 91 175 XP_065197121.1 uncharacterized protein LOC135828630 [Sycon ciliatum] diamond 258 112 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
28130726 28130726 PRJNA939415_P_NODE_74245_length_260_cov_1.278075_g73823_i0 PRJNA939415 74245 260 1.278075 3.322995 Sycon ciliatum 27933 Porifera other_Eukaryota 85.9 3.01e-17   NR XP_065188258.1 27933 g73823 i0 51.4 1.70769230769231 74 36 85.4 0 3 224 36 109 XP_065188258.1 uncharacterized protein LOC135819037 [Sycon ciliatum] diamond 444 85.9 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
32869351 32869351 PRJNA939415_P_NODE_60460_length_273_cov_2.755000_g60038_i0 PRJNA939415 60460 273 2.755 7.52115 Amphimedon queenslandica 400682 Porifera other_Eukaryota 79.7 5.49e-15   NR XP_011402843.1 400682 g60038 i0 90 1.31868131868132 40 4 44 0 120 1 581 620 XP_011402843.1 PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [Amphimedon queenslandica] diamond 360 79.7 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;