RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA939415", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA939415 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29337365 29337365 PRJNA939415_P_NODE_80089_length_254_cov_1.475138_g79667_i0 PRJNA939415 80089 254 1.475138 3.74685052 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 65.1 5.78e-10   NR XP_033633085.1 7604 g79667 i0 38.5 2.78740157480315 78 48 92.1 0 20 253 149 226 XP_033633085.1 metabotropic glutamate receptor 7-like [Asterias rubens] diamond 708 65.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
30530558 30530558 PRJNA939415_P_NODE_65933_length_268_cov_1.512821_g65511_i0 PRJNA939415 65933 268 1.512821 4.05436028 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 53.5 7.86e-6   NR XP_011674246.1 7668 g65511 i0 48.3 2.80970149253731 58 23 63.8 2 177 7 223 274 XP_011674246.1 uncharacterized protein LOC100887898 [Strongylocentrotus purpuratus] diamond 753 53.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
32774811 32774811 PRJNA939415_P_NODE_65380_length_268_cov_3.292308_g64958_i0 PRJNA939415 65380 268 3.292308 8.82338544 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 57.4 3.63e-7   NR XP_030829799.1 7668 g64958 i0 66.7 0.794776119402985 36 12 40.3 0 155 262 1015 1050 XP_030829799.1 NACHT domain- and WD repeat-containing protein 1-like [Strongylocentrotus purpuratus] diamond 213 57.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;