RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA939415", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA939415 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26739700 26739700 PRJNA939415_P_NODE_109421_length_209_cov_4.397059_g108999_i0 PRJNA939415 109421 209 4.397059 9.18985331 Basidiobolus meristosporus CBS 931.73 1314790 Fungi Fungi 58.2 8.63e-8   NR ORY07243.1 1314790 g108999 i0 47.1 0.976076555023923 68 34 97.6 1 208 5 293 358 ORY07243.1 P-loop containing nucleoside triphosphate hydrolase protein, partial [Basidiobolus meristosporus CBS 931.73] diamond 204 58.2 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus meristosporus
27151037 27151037 PRJNA939415_P_NODE_24942_length_310_cov_7.362869_g24520_i0 PRJNA939415 24942 310 7.362869 22.8248939 Basidiobolus meristosporus CBS 931.73 1314790 Fungi Fungi 66.2 4.64e-10   NR ORY07232.1 1314790 g24520 i0 67.4 0.416129032258065 43 14 41.6 0 289 161 539 581 ORY07232.1 NAD(P)H-nitrate reductase [Basidiobolus meristosporus CBS 931.73] diamond 129 66.2 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus meristosporus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;