RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where bioproject = "PRJNA939415", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 8 ✖

tax_kingdom 1

  • Bacillati · 8 ✖

bioproject 1

  • PRJNA939415 · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8568405 8568405 PRJNA939415_P_NODE_40047_length_294_cov_4.380090_g39625_i0 PRJNA939415 40047 294 4.38009 12.8774646 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 159 1.56e-34   NTclustered gi|2874254122|emb|OY970207.1| 3107663 g39625 i0 81.771 3.26530612244898 192 33 65 2 104 294 1677102 1677292 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD10113.bin.c.5 genome assembly, chromosome: 1 blastn 960 159 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
23867192 23867192 PRJNA939415_P_NODE_107099_length_219_cov_5.986301_g106677_i0 PRJNA939415 107099 219 5.986301 13.10999919 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 122 1.4599999999999995e-23   NTclustered gi|2874253986|emb|OY970311.1| 3107663 g106677 i0 83.333 12.7397260273973 138 17 62 4 5 139 869263 869397 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD04463.bin.c.13 genome assembly, chromosome: 1 blastn 2790 122 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
26867087 26867087 PRJNA939415_P_NODE_47301_length_286_cov_2.774648_g46879_i0 PRJNA939415 47301 286 2.774648 7.93549328 Candidatus Aquilonibacter sp. 2952903 Bacteria Bacteria 137 1.45e-36   NR HUO27545.1 2952903 g46879 i0 74.1 4.47902097902098 85 22 89.2 0 25 279 1 85 HUO27545.1 carboxylate-amine ligase [Candidatus Aquilonibacter sp.] diamond 1281 137 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Aquilonibacter Candidatus Aquilonibacter sp.
27720602 27720602 PRJNA939415_P_NODE_67144_length_266_cov_4.673575_g66722_i0 PRJNA939415 67144 266 4.673575 12.4317095 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 148 3.25e-39   NR MFA7483777.1 3107663 g66722 i0 87.5 1.98496240601504 88 11 99.2 0 265 2 500 587 MFA7483777.1 CusA/CzcA family heavy metal efflux RND transporter [Vulcanimicrobiota bacterium] diamond 528 148 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
29267025 29267025 PRJNA939415_P_NODE_52029_length_281_cov_4.884615_g51607_i0 PRJNA939415 52029 281 4.884615 13.72576815 Candidatus Cybelea sp. 2952917 Bacteria Bacteria 92 1.03e-19   NR HEY1868966.1 2952917 g51607 i0 54.4 0.96085409252669 90 41 96.1 0 12 281 1 90 HEY1868966.1 hypothetical protein [Candidatus Cybelea sp.] diamond 270 92 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Cybelea Candidatus Cybelea sp.
29803854 29803854 PRJNA939415_P_NODE_26031_length_310_cov_4.873418_g25609_i0 PRJNA939415 26031 310 4.873418 15.1075958 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 68.2 1.51e-12   NR MFA7479225.1 3107663 g25609 i0 67.4 0.445161290322581 46 15 44.5 0 1 138 37 82 MFA7479225.1 hypothetical protein [Vulcanimicrobiota bacterium] diamond 138 68.2 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
30056514 30056514 PRJNA939415_P_NODE_111011_length_202_cov_4.519380_g110589_i0 PRJNA939415 111011 202 4.51938 9.1291476 Candidatus Cybelea sp. 2952917 Bacteria Bacteria 47.8 3.62e-4   NR HZY96916.1 2952917 g110589 i0 42.6 0.905940594059406 61 35 90.6 0 6 188 394 454 HZY96916.1 lanthionine synthetase LanC family protein [Candidatus Cybelea sp.] diamond 183 47.8 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Cybelea Candidatus Cybelea sp.
32301735 32301735 PRJNA939415_P_NODE_90599_length_245_cov_1.703488_g90177_i0 PRJNA939415 90599 245 1.703488 4.1735456 Candidatus Xenobia bacterium 3036772 Bacteria Bacteria 52 2.03e-5   NR HEY4002610.1 3036772 g90177 i0 38.5 0.955102040816327 78 48 95.5 0 238 5 101 178 HEY4002610.1 VWA domain-containing protein [Candidatus Xenobia bacterium] diamond 234 52 1 Bacteria   Bacillati Vulcanimicrobiota Candidatus Xenobia       Candidatus Xenobia bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;