contig_metadata
12 rows where bioproject = "PRJNA939415", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6360759 | 6360759 | PRJNA939415_P_NODE_81025_length_253_cov_1.666667_g80603_i0 | PRJNA939415 | 81025 | 253 | 1.666667 | 4.21666751 | Mesomycoplasma | 2923352 | Bacteria | Bacteria | 468 | 1.92e-127 | NTclustered | gi|1720621726|gb|CP035041.1| | 2100 | g80603 | i0 | 100 | 15.8695652173913 | 253 | 0 | 100 | 0 | 1 | 253 | 639775 | 640027 | Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome | blastn | 4015 | 468 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 6360799 | 6360799 | PRJNA939415_P_NODE_86265_length_248_cov_3.537143_g85843_i0 | PRJNA939415 | 86265 | 248 | 3.537143 | 8.77211464 | Mesomycoplasma | 2923352 | Bacteria | Bacteria | 459 | 1.13e-124 | NTclustered | gi|1720621726|gb|CP035041.1| | 2100 | g85843 | i0 | 100 | 16.0282258064516 | 248 | 0 | 100 | 0 | 1 | 248 | 643973 | 643726 | Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome | blastn | 3975 | 459 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 10185190 | 10185190 | PRJNA939415_P_NODE_41128_length_293_cov_1.950000_g40706_i0 | PRJNA939415 | 41128 | 293 | 1.95 | 5.7135 | Mesomycoplasma | 2923352 | Bacteria | Bacteria | 540 | 4.76e-149 | NTclustered | gi|1720621726|gb|CP035041.1| | 2100 | g40706 | i0 | 100 | 28.6587030716724 | 292 | 0 | 99 | 0 | 2 | 293 | 645162 | 644871 | Mesomycoplasma hyorhinis strain JF5820 chromosome, complete genome | blastn | 8397 | 540 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 10185492 | 10185492 | PRJNA939415_P_NODE_9228_length_523_cov_9.848889_g8811_i0 | PRJNA939415 | 9228 | 523 | 9.848889 | 51.50968947 | Bacteria | 2 | Bacteria | Bacteria | 955 | 0 | NTclustered | gi|365822471|gb|JN935874.1| | 51364 | g8811 | i0 | 99.618 | 176.988527724665 | 523 | 2 | 100 | 0 | 1 | 523 | 939 | 1461 | Mycoplasma cottewii strain VIS 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 92565 | 955 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma cottewii | ||
| 11119686 | 11119686 | PRJNA939415_P_NODE_68929_length_265_cov_1.489583_g68507_i0 | PRJNA939415 | 68929 | 265 | 1.489583 | 3.94739495 | Mycoplasma cottewii | 51364 | Bacteria | Bacteria | 396 | 9.71e-106 | NTclustered | gi|2294785939|gb|CP103424.1| | 51364 | g68507 | i0 | 93.585 | 2.10566037735849 | 265 | 17 | 100 | 0 | 1 | 265 | 662788 | 663052 | Mycoplasma cottewii strain VIS chromosome, complete genome | blastn | 558 | 396 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma cottewii | ||
| 12735647 | 12735647 | PRJNA939415_P_NODE_110890_length_202_cov_7.697674_g110468_i0 | PRJNA939415 | 110890 | 202 | 7.697674 | 15.54930148 | Mesomycoplasma | 2923352 | Bacteria | Bacteria | 374 | 3.3e-99 | NTclustered | gi|2713084492|gb|CP150431.1| | 2100 | g110468 | i0 | 100 | 15 | 202 | 0 | 100 | 0 | 1 | 202 | 672204 | 672003 | Mesomycoplasma hyorhinis strain Nahrain chromosome | blastn | 3030 | 374 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 16218612 | 16218612 | PRJNA939415_P_NODE_48453_length_285_cov_2.386792_g48031_i0 | PRJNA939415 | 48453 | 285 | 2.386792 | 6.8023572 | Mycoplasma yeatsii | 51365 | Bacteria | Bacteria | 497 | 2.81e-136 | NTclustered | gi|756767228|gb|CP007520.1| | 743967 | g48031 | i0 | 98.239 | 98.0140350877193 | 284 | 5 | 99 | 0 | 1 | 284 | 118025 | 118308 | Mycoplasma yeatsii GM274B | blastn | 27934 | 497 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma yeatsii | ||
| 17833907 | 17833907 | PRJNA939415_P_NODE_31814_length_310_cov_2.873418_g31392_i0 | PRJNA939415 | 31814 | 310 | 2.873418 | 8.9075958 | Mycoplasma | 2093 | Bacteria | Bacteria | 243 | 1.6000000000000004e-59 | NTclustered | gi|731474337|gb|CP010267.1| | 2103 | g31392 | i0 | 95.455 | 17.141935483871 | 154 | 3 | 97 | 1 | 1 | 150 | 159262 | 159415 | Mycoplasma mycoides subsp. mycoides strain izsam_mm5713, complete genome | blastn | 5314 | 243 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma mycoides | ||
| 20041568 | 20041568 | PRJNA939415_P_NODE_13536_length_421_cov_1.931034_g13117_i0 | PRJNA939415 | 13536 | 421 | 1.931034 | 8.12965314 | Mycoplasmopsis arginini | 2094 | Bacteria | Bacteria | 761 | 0 | NTclustered | gi|2668342370|gb|CP143577.1| | 2094 | g13117 | i0 | 99.287 | 160.923990498812 | 421 | 3 | 100 | 0 | 1 | 421 | 371699 | 371279 | Mycoplasmopsis arginini strain NCTC 10129 chromosome, complete genome | blastn | 67749 | 761 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis arginini | |||
| 20382521 | 20382521 | PRJNA939415_P_NODE_104456_length_228_cov_2.477419_g104034_i0 | PRJNA939415 | 104456 | 228 | 2.477419 | 5.64851532 | Mesomycoplasma | 2923352 | Bacteria | Bacteria | 422 | 1.34e-113 | NTclustered | gi|2713084492|gb|CP150431.1| | 2100 | g104034 | i0 | 100 | 34.7105263157895 | 228 | 0 | 100 | 0 | 1 | 228 | 672170 | 672397 | Mesomycoplasma hyorhinis strain Nahrain chromosome | blastn | 7914 | 422 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 24208203 | 24208203 | PRJNA939415_P_NODE_64659_length_269_cov_2.229592_g64237_i0 | PRJNA939415 | 64659 | 269 | 2.229592 | 5.99760248 | Mesomycoplasma | 2923352 | Bacteria | Bacteria | 497 | 2.63e-136 | NTclustered | gi|1563681465|emb|LR214949.1| | 2100 | g64237 | i0 | 100 | 68.449814126394 | 269 | 0 | 100 | 0 | 1 | 269 | 64926 | 65194 | Mycoplasma hyorhinis strain NCTC10121 genome assembly, plasmid: 3 | blastn | 18413 | 497 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 28983242 | 28983242 | PRJNA939415_P_NODE_107468_length_218_cov_4.413793_g107046_i0 | PRJNA939415 | 107468 | 218 | 4.413793 | 9.62206874 | Candidatus Izimaplasma bacterium HR2 | 1541960 | Bacteria | Bacteria | 85.5 | 1.87e-17 | NR | KFZ26362.1 | 1541960 | g107046 | i0 | 54.9 | 0.977064220183486 | 71 | 32 | 97.7 | 0 | 3 | 215 | 323 | 393 | KFZ26362.1 MAG: Adenylosuccinate lyase [Candidatus Izimaplasma bacterium HR2] | diamond | 213 | 85.5 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Candidatus Izemoplasmatales | Candidatus Izemoplasmataceae | Candidatus Izemoplasma | Candidatus Izimoplasma sp. HR2 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;