RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA939415", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA939415 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17494276 17494276 PRJNA939415_P_NODE_67794_length_266_cov_1.761658_g67372_i0 PRJNA939415 67794 266 1.761658 4.68601028 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 120 2.12e-30   NR KAF4739263.1 32597 g67372 i0 65.5 12.6541353383459 87 29 97 1 259 2 280 366 KAF4739263.1 hypothetical protein FOZ63_025127 [Perkinsus olseni] diamond 3366 120 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
28319999 28319999 PRJNA939415_P_NODE_77126_length_257_cov_1.603261_g76704_i0 PRJNA939415 77126 257 1.603261 4.12038077 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 42 0.00816   NR XP_002788279.1 423536 g76704 i0 48.4 0.361867704280156 31 16 36.2 0 132 224 15 45 XP_002788279.1 hypothetical protein Pmar_PMAR007360, partial [Perkinsus marinus ATCC 50983] diamond 93 42 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;