RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA939415", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Poribacteria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 5 ✖

tax_clade 1

  • Bacteria candidate phyla · 5 ✖

bioproject 1

  • PRJNA939415 · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5085074 5085074 PRJNA939415_P_NODE_86684_length_248_cov_2.182857_g86262_i0 PRJNA939415 86684 248 2.182857 5.41348536 Bacteria 2 Bacteria Bacteria 91.6 4.75e-14   NTclustered gi|2531946086|emb|OY282386.1| 2026781 g86262 i0 93.443 10.8346774193548 61 4 25 0 1 61 4104730 4104790 MAG: Candidatus Poribacteria bacterium genome assembly, chromosome: 1 blastn 2687 91.6 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
12394958 12394958 PRJNA939415_P_NODE_57850_length_276_cov_1.463054_g57428_i0 PRJNA939415 57850 276 1.463054 4.03802904 Pseudomonadati 3379134 Bacteria Bacteria 163 2.8499999999999994e-46   NR MBM3215564.1 2026781 g57428 i0 83.7 15.9673913043478 92 15 100 0 276 1 33 124 MBM3215564.1 mandelate racemase/muconate lactonizing enzyme family protein [Candidatus Poribacteria bacterium] diamond 4407 163 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
23868612 23868612 PRJNA939415_P_NODE_78599_length_255_cov_3.131868_g78177_i0 PRJNA939415 78599 255 3.131868 7.9862634 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 150 2.5599999999999993e-40   NR MBD3181297.1 2026781 g78177 i0 78.6 3.95294117647059 84 18 98.8 0 253 2 45 128 MBD3181297.1 ADP-ribosylglycohydrolase family protein [Candidatus Poribacteria bacterium] diamond 1008 150 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
29424885 29424885 PRJNA939415_P_NODE_25749_length_310_cov_5.194093_g25327_i0 PRJNA939415 25749 310 5.194093 16.1016883 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 54.7 5.43e-6   NR MCH8293322.1 2026781 g25327 i0 32.5 0.803225806451613 83 56 80.3 0 258 10 885 967 MCH8293322.1 serine/threonine-protein kinase PknK [Candidatus Poribacteria bacterium] diamond 249 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
32617541 32617541 PRJNA939415_P_NODE_97360_length_238_cov_5.000000_g96938_i0 PRJNA939415 97360 238 5 11.9 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 98.2 1.09e-21   NR MDE0186523.1 2026781 g96938 i0 63.2 0.957983193277311 76 28 95.8 0 1 228 228 303 MDE0186523.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 228 98.2 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;