RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA939370", tax_phylum = "Lenarviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Lenarviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA939370 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3465476 3465476 PRJNA939370_S_NODE_2043_length_191_cov_1.760563_g1991_i0 PRJNA939370 2043 191 1.760563 3.36267533 Ripagrog virus 3130723 Viruses Viruses 165 2.02e-36   NTclustered gi|2717320584|gb|PP173025.1| 3130723 g1991 i0 95.192 228.010471204188 104 5 54 0 3 106 1577 1680 MAG: Ripagrog virus isolate KCAP2_k141_407948 genomic sequence blastn 43550 165 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripagrog virus
3465489 3465489 PRJNA939370_S_NODE_3003_length_164_cov_1.313043_g2951_i0 PRJNA939370 3003 164 1.313043 2.15339052 Ripagrog virus 3130723 Viruses Viruses 207 2.76e-49   NTclustered gi|2717320584|gb|PP173025.1| 3130723 g2951 i0 94.161 194.920731707317 137 7 83 1 3 138 1709 1573 MAG: Ripagrog virus isolate KCAP2_k141_407948 genomic sequence blastn 31967 207 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripagrog virus
16217637 16217637 PRJNA939370_S_NODE_2553_length_172_cov_3.308943_g2501_i0 PRJNA939370 2553 172 3.308943 5.69138196 Chronadern virus 3129930 Viruses Viruses 206 1.05e-48   NTclustered gi|2717318673|gb|PP172327.1| 3129930 g2501 i0 97.521 290.098837209302 121 2 98 1 53 172 146 26 MAG: Chronadern virus isolate CN1C_k141_128010 genomic sequence blastn 49897 206 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Chronadern virus
31731608 31731608 PRJNA939370_S_NODE_1977_length_194_cov_1.420690_g1925_i0 PRJNA939370 1977 194 1.42069 2.7561386 Leviviridae sp. 2027243 Viruses Viruses 97.4 7.86e-22   NR URG16066.1 2027243 g1925 i0 72.4 1.80927835051546 58 16 89.7 0 16 189 282 339 URG16066.1 MAG: RNA dependent RNA polymerase, partial [Leviviridae sp.] diamond 351 97.4 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;