contig_metadata
5 rows where bioproject = "PRJNA939370", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2531845 | 2531845 | PRJNA939370_S_NODE_202_length_594_cov_3.286239_g156_i0 | PRJNA939370 | 202 | 594 | 3.286239 | 19.52025966 | Granulicella | 940557 | Bacteria | Bacteria | 907 | 0 | NTclustered | gi|470487846|ref|NR_076839.1| | 940615 | g156 | i0 | 94.276 | 175.579124579125 | 594 | 32 | 99 | 2 | 3 | 594 | 1329 | 1922 | Granulicella tundricola strain MP5ACTX9 23S ribosomal RNA gene, complete sequence | blastn | 104294 | 907 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Granulicella | Granulicella tundricola | ||
| 4743034 | 4743034 | PRJNA939370_S_NODE_3264_length_161_cov_1.098214_g3212_i0 | PRJNA939370 | 3264 | 161 | 1.098214 | 1.76812454 | uncultured Granulicella sp. | 1241325 | Bacteria | Bacteria | 250 | 4.42e-62 | NTclustered | gi|2626255659|emb|OY843766.1| | 1241325 | g3212 | i0 | 96.078 | 85.832298136646 | 153 | 6 | 95 | 0 | 9 | 161 | 3195313 | 3195161 | MAG: uncultured Granulicella sp. isolate e6d70442-04f8-4699-a368-e2225de37168 genome assembly, chromosome: 1 | blastn | 13819 | 250 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Granulicella | uncultured Granulicella sp. | ||
| 21316759 | 21316759 | PRJNA939370_S_NODE_877_length_309_cov_2.292308_g825_i0 | PRJNA939370 | 877 | 309 | 2.292308 | 7.08323172 | uncultured Granulicella sp. | 1241325 | Bacteria | Bacteria | 455 | 1.88e-123 | NTclustered | gi|2836016418|emb|OZ196148.1| | 1241325 | g825 | i0 | 93.204 | 136.514563106796 | 309 | 21 | 100 | 0 | 1 | 309 | 506739 | 507047 | MAG: uncultured Granulicella sp. isolate 9057d4d9-b77b-4c6f-b84b-ea5519435b63 genome assembly, chromosome: 1 | blastn | 42183 | 455 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Granulicella | uncultured Granulicella sp. | ||
| 21658416 | 21658416 | PRJNA939370_S_NODE_2057_length_191_cov_0.830986_g2005_i0 | PRJNA939370 | 2057 | 191 | 0.830986 | 1.58718326 | Holophagaceae | 574976 | Bacteria | Bacteria | 52.8 | 0.016 | NTclustered | gi|84452199|emb|AM180897.1| | 171953 | g2005 | i0 | 100 | 2.05235602094241 | 28 | 0 | 15 | 0 | 153 | 180 | 1057 | 1030 | Uncultured Acidobacteria bacterium partial 23S rRNA gene, clone LS_LKC11_kan4 | blastn | 392 | 52.8 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 22591720 | 22591720 | PRJNA939370_S_NODE_2598_length_171_cov_1.245902_g2546_i0 | PRJNA939370 | 2598 | 171 | 1.245902 | 2.13049242 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 267 | 4.699999999999999e-67 | NTclustered | gi|2874253678|emb|OY969112.1| | 171953 | g2546 | i0 | 94.737 | 139.789473684211 | 171 | 9 | 100 | 0 | 1 | 171 | 4733370 | 4733540 | MAG: uncultured Acidobacteriota bacterium isolate MFD04212.bin.1.16 genome assembly, chromosome: 1 | blastn | 23904 | 267 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;