RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA939370", tax_kingdom = "Pseudomonadati" and tax_phylum = "Abditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 2 ✖

tax_kingdom 1

  • Pseudomonadati · 2 ✖

bioproject 1

  • PRJNA939370 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13668285 13668285 PRJNA939370_S_NODE_1811_length_203_cov_0.974026_g1759_i0 PRJNA939370 1811 203 0.974026 1.97727278 Abditibacteriota bacterium 2783868 Bacteria Bacteria 316 5.679999999999998e-82   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g1759 i0 96.373 4.20689655172414 193 5 95 2 1 192 2852660 2852851 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 854 316 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
18766423 18766423 PRJNA939370_S_NODE_2455_length_175_cov_1.214286_g2403_i0 PRJNA939370 2455 175 1.214286 2.1250005 Abditibacteriota bacterium 2783868 Bacteria Bacteria 291 2.8699999999999993e-74   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g2403 i0 96.571 99.7542857142857 175 6 100 0 1 175 2851451 2851625 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 17457 291 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;