RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA939370", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA939370 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17492988 17492988 PRJNA939370_S_NODE_394_length_465_cov_1.733173_g342_i0 PRJNA939370 394 465 1.733173 8.05925445 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 416 1.39e-111   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g342 i0 83.333 95.5268817204301 480 51 100 21 1 465 5031240 5031705 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 44420 416 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
21316729 21316729 PRJNA939370_S_NODE_1217_length_252_cov_1.669951_g1165_i0 PRJNA939370 1217 252 1.669951 4.20827652 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 361 3.34e-95   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g1165 i0 92.46 91.0277777777778 252 19 100 0 1 252 5032757 5032506 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 22939 361 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
25140810 25140810 PRJNA939370_S_NODE_2360_length_178_cov_2.139535_g2308_i0 PRJNA939370 2360 178 2.139535 3.8083723 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 222 1.08e-53   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g2308 i0 92.405 143.224719101124 158 8 100 3 1 157 5032892 5033046 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 25494 222 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;