contig_metadata
22 rows where bioproject = "PRJNA939370" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 914611 | 914611 | PRJNA939370_S_NODE_1281_length_245_cov_1.127551_g1229_i0 | PRJNA939370 | 1281 | 245 | 1.127551 | 2.76249995 | uncultured Planctomycetota bacterium | 120965 | Bacteria | Bacteria | 331 | 2.5400000000000002e-86 | NTclustered | gi|2874254043|emb|OY970367.1| | 120965 | g1229 | i0 | 91.322 | 15.6081632653061 | 242 | 21 | 99 | 0 | 1 | 242 | 3453945 | 3453704 | MAG: uncultured Planctomycetota bacterium isolate MFD04580.bin.c.2 genome assembly, chromosome: 1 | blastn | 3824 | 331 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | uncultured Planctomycetota bacterium | |||||
| 914625 | 914625 | PRJNA939370_S_NODE_2361_length_178_cov_1.759690_g2309_i0 | PRJNA939370 | 2361 | 178 | 1.75969 | 3.1322482 | uncultured Planctomycetota bacterium | 120965 | Bacteria | Bacteria | 224 | 3.0199999999999996e-54 | NTclustered | gi|2874254043|emb|OY970367.1| | 120965 | g2309 | i0 | 96.377 | 171.960674157303 | 138 | 1 | 76 | 4 | 1 | 136 | 3454726 | 3454591 | MAG: uncultured Planctomycetota bacterium isolate MFD04580.bin.c.2 genome assembly, chromosome: 1 | blastn | 30609 | 224 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | uncultured Planctomycetota bacterium | |||||
| 2190046 | 2190046 | PRJNA939370_S_NODE_1702_length_209_cov_1.843750_g1650_i0 | PRJNA939370 | 1702 | 209 | 1.84375 | 3.8534375 | Paludisphaera borealis | 1387353 | Bacteria | Bacteria | 296 | 7.67e-76 | NTclustered | gi|1133581311|gb|CP019082.1| | 1387353 | g1650 | i0 | 92.754 | 134.521531100478 | 207 | 11 | 98 | 4 | 1 | 205 | 121314 | 121518 | Paludisphaera borealis strain PX4 chromosome, complete genome | blastn | 28115 | 296 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Paludisphaera | Paludisphaera borealis | |
| 3808189 | 3808189 | PRJNA939370_S_NODE_3063_length_163_cov_1.964912_g3011_i0 | PRJNA939370 | 3063 | 163 | 1.964912 | 3.20280656 | Aquisphaera | 1511635 | Bacteria | Bacteria | 215 | 1.64e-51 | NTclustered | gi|1730068067|gb|CP042997.1| | 406548 | g3011 | i0 | 91.72 | 122.539877300613 | 157 | 10 | 96 | 3 | 8 | 163 | 5178492 | 5178338 | Aquisphaera giovannonii strain OJF2 chromosome, complete genome | blastn | 19974 | 215 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Aquisphaera | Aquisphaera giovannonii | |
| 7292800 | 7292800 | PRJNA939370_S_NODE_2826_length_167_cov_0.864407_g2774_i0 | PRJNA939370 | 2826 | 167 | 0.864407 | 1.44355969 | Humisphaera borealis | 2807512 | Bacteria | Bacteria | 228 | 2.1699999999999995e-55 | NTclustered | gi|1927742986|gb|CP063458.1| | 2807512 | g2774 | i0 | 92.994 | 14.7724550898204 | 157 | 10 | 96 | 1 | 11 | 167 | 5063297 | 5063142 | Humisphaera borealis strain M1803 chromosome, complete genome | blastn | 2467 | 228 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Tepidisphaerales | Tepidisphaeraceae | Humisphaera | Humisphaera borealis | |
| 8567613 | 8567613 | PRJNA939370_S_NODE_2287_length_181_cov_2.037879_g2235_i0 | PRJNA939370 | 2287 | 181 | 2.037879 | 3.68856099 | Opitutus sp. VeGlc2 | 134634 | Bacteria | Bacteria | 268 | 1.3999999999999999e-67 | NTclustered | gi|164510706|emb|AJ966885.1| | 134634 | g2235 | i0 | 93.37 | 143.911602209945 | 181 | 12 | 100 | 0 | 1 | 181 | 2690 | 2510 | Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246 | blastn | 26048 | 268 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. VeGlc2 | |
| 9842671 | 9842671 | PRJNA939370_S_NODE_2548_length_173_cov_0.862903_g2496_i0 | PRJNA939370 | 2548 | 173 | 0.862903 | 1.49282219 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 285 | 1.32e-72 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g2496 | i0 | 97.041 | 77.1156069364162 | 169 | 5 | 98 | 0 | 5 | 173 | 5153560 | 5153392 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 13341 | 285 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 11118321 | 11118321 | PRJNA939370_S_NODE_2249_length_183_cov_1.022388_g2197_i0 | PRJNA939370 | 2249 | 183 | 1.022388 | 1.87097004 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 292 | 8.44e-75 | NTclustered | gi|2874253757|emb|OY969698.1| | 100233 | g2197 | i0 | 96.089 | 66.6284153005465 | 179 | 7 | 98 | 0 | 1 | 179 | 4420184 | 4420006 | MAG: uncultured Planctomycetaceae bacterium isolate MFD00082.bin.2.56 genome assembly, chromosome: 1 | blastn | 12193 | 292 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 11118334 | 11118334 | PRJNA939370_S_NODE_889_length_307_cov_1.360465_g837_i0 | PRJNA939370 | 889 | 307 | 1.360465 | 4.17662755 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 385 | 2.49e-102 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g837 | i0 | 89.508 | 74.2052117263844 | 305 | 30 | 99 | 2 | 4 | 307 | 1315949 | 1316252 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 22781 | 385 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 14942568 | 14942568 | PRJNA939370_S_NODE_1472_length_226_cov_1.435028_g1420_i0 | PRJNA939370 | 1472 | 226 | 1.435028 | 3.24316328 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 346 | 8.24e-91 | NTclustered | gi|2874253948|emb|OY970273.1| | 100233 | g1420 | i0 | 94.248 | 118.809734513274 | 226 | 13 | 100 | 0 | 1 | 226 | 2621598 | 2621373 | MAG: uncultured Planctomycetaceae bacterium isolate MFD09495.bin.c.1 genome assembly, chromosome: 1 | blastn | 26851 | 346 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 14942573 | 14942573 | PRJNA939370_S_NODE_1732_length_208_cov_0.949686_g1680_i0 | PRJNA939370 | 1732 | 208 | 0.949686 | 1.97534688 | Nibricoccus sp. IMCC34717 | 3034021 | Bacteria | Bacteria | 329 | 7.52e-86 | NTclustered | gi|2850969968|gb|CP119759.1| | 3034021 | g1680 | i0 | 95.192 | 88.6538461538462 | 208 | 10 | 100 | 0 | 1 | 208 | 1404229 | 1404436 | Nibricoccus sp. IMCC34717 chromosome, complete genome | blastn | 18440 | 329 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus sp. IMCC34717 | |
| 14942587 | 14942587 | PRJNA939370_S_NODE_2912_length_165_cov_1.775862_g2860_i0 | PRJNA939370 | 2912 | 165 | 1.775862 | 2.9301723 | Paludisphaera borealis | 1387353 | Bacteria | Bacteria | 200 | 4.659999999999998e-47 | NTclustered | gi|1133581311|gb|CP019082.1| | 1387353 | g2860 | i0 | 88.623 | 13.2 | 167 | 15 | 100 | 4 | 1 | 165 | 121636 | 121472 | Paludisphaera borealis strain PX4 chromosome, complete genome | blastn | 2178 | 200 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Paludisphaera | Paludisphaera borealis | |
| 16217623 | 16217623 | PRJNA939370_S_NODE_1553_length_220_cov_1.023392_g1501_i0 | PRJNA939370 | 1553 | 220 | 1.023392 | 2.2514624 | uncultured Planctomycetota bacterium | 120965 | Bacteria | Bacteria | 276 | 1.06e-69 | NTclustered | gi|2874254043|emb|OY970367.1| | 120965 | g1501 | i0 | 89.45 | 94.4409090909091 | 218 | 23 | 99 | 0 | 3 | 220 | 3454785 | 3455002 | MAG: uncultured Planctomycetota bacterium isolate MFD04580.bin.c.2 genome assembly, chromosome: 1 | blastn | 20777 | 276 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | uncultured Planctomycetota bacterium | |||||
| 16217624 | 16217624 | PRJNA939370_S_NODE_1673_length_212_cov_1.128834_g1621_i0 | PRJNA939370 | 1673 | 212 | 1.128834 | 2.39312808 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 279 | 7.850000000000001e-71 | NTclustered | gi|2874253757|emb|OY969698.1| | 100233 | g1621 | i0 | 90.61 | 117.353773584906 | 213 | 17 | 100 | 3 | 1 | 212 | 4422611 | 4422401 | MAG: uncultured Planctomycetaceae bacterium isolate MFD00082.bin.2.56 genome assembly, chromosome: 1 | blastn | 24879 | 279 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 16558697 | 16558697 | PRJNA939370_S_NODE_973_length_289_cov_1.358333_g921_i0 | PRJNA939370 | 973 | 289 | 1.358333 | 3.92558237 | Planctomycetia | 203683 | Bacteria | Bacteria | 407 | 4.959999999999999e-109 | NTclustered | gi|2874254106|emb|OY970189.1| | 100233 | g921 | i0 | 92.069 | 111.318339100346 | 290 | 22 | 100 | 1 | 1 | 289 | 5936619 | 5936908 | MAG: uncultured Planctomycetaceae bacterium isolate MFD09603.bin.2.127 genome assembly, chromosome: 1 | blastn | 32171 | 407 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 17833633 | 17833633 | PRJNA939370_S_NODE_1594_length_217_cov_1.273810_g1542_i0 | PRJNA939370 | 1594 | 217 | 1.27381 | 2.7641677 | Singulisphaera | 466152 | Bacteria | Bacteria | 329 | 7.91e-86 | NTclustered | gi|485099129|ref|NR_102524.1| | 466153 | g1542 | i0 | 94.009 | 249.967741935484 | 217 | 13 | 100 | 0 | 1 | 217 | 1526 | 1742 | Singulisphaera acidiphila strain MOB10 23S ribosomal RNA gene, complete sequence | blastn | 54243 | 329 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Singulisphaera | Singulisphaera acidiphila | |
| 19107547 | 19107547 | PRJNA939370_S_NODE_3275_length_161_cov_0.991071_g3223_i0 | PRJNA939370 | 3275 | 161 | 0.991071 | 1.59562431 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 202 | 1.26e-47 | NTclustered | gi|164510706|emb|AJ966885.1| | 134634 | g3223 | i0 | 89.873 | 31.1366459627329 | 158 | 14 | 98 | 2 | 3 | 160 | 3646 | 3801 | Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246 | blastn | 5013 | 202 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. VeGlc2 | |
| 21316745 | 21316745 | PRJNA939370_S_NODE_2397_length_177_cov_0.960938_g2345_i0 | PRJNA939370 | 2397 | 177 | 0.960938 | 1.70086026 | Nibricoccus aquaticus | 2576891 | Bacteria | Bacteria | 294 | 2.25e-75 | NTclustered | gi|1243404978|gb|CP023344.1| | 2576891 | g2345 | i0 | 96.61 | 14.5310734463277 | 177 | 6 | 100 | 0 | 1 | 177 | 2497126 | 2497302 | Nibricoccus aquaticus strain HZ-65 chromosome, complete genome | blastn | 2572 | 294 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus aquaticus | |
| 21658436 | 21658436 | PRJNA939370_S_NODE_357_length_482_cov_1.503464_g305_i0 | PRJNA939370 | 357 | 482 | 1.503464 | 7.24669648 | Planctomycetia | 203683 | Bacteria | Bacteria | 534 | 3.82e-147 | NTclustered | gi|485099129|ref|NR_102524.1| | 466153 | g305 | i0 | 87.852 | 62.8817427385892 | 461 | 48 | 95 | 8 | 23 | 482 | 1476 | 1023 | Singulisphaera acidiphila strain MOB10 23S ribosomal RNA gene, complete sequence | blastn | 30309 | 536 | 0.996268656716418 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Singulisphaera | Singulisphaera acidiphila | |
| 22591719 | 22591719 | PRJNA939370_S_NODE_2338_length_179_cov_1.546154_g2286_i0 | PRJNA939370 | 2338 | 179 | 1.546154 | 2.76761566 | uncultured Planctomycetota bacterium | 120965 | Bacteria | Bacteria | 279 | 6.39e-71 | NTclustered | gi|2874254043|emb|OY970367.1| | 120965 | g2286 | i0 | 95.429 | 490.050279329609 | 175 | 8 | 98 | 0 | 5 | 179 | 3455397 | 3455223 | MAG: uncultured Planctomycetota bacterium isolate MFD04580.bin.c.2 genome assembly, chromosome: 1 | blastn | 87719 | 279 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | uncultured Planctomycetota bacterium | |||||
| 25140825 | 25140825 | PRJNA939370_S_NODE_640_length_363_cov_1.891720_g588_i0 | PRJNA939370 | 640 | 363 | 1.89172 | 6.8669436 | Isosphaeraceae bacterium EP7 | 3139350 | Bacteria | Bacteria | 486 | 7.959999999999998e-133 | NTclustered | gi|2719878338|gb|CP151667.1| | 3139350 | g588 | i0 | 90.959 | 127.845730027548 | 365 | 27 | 99 | 4 | 4 | 363 | 1599427 | 1599790 | Isosphaeraceae bacterium EP7 chromosome, complete genome | blastn | 46408 | 486 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Isosphaeraceae bacterium EP7 | ||
| 32680100 | 32680100 | PRJNA939370_S_NODE_540_length_394_cov_0.910145_g488_i0 | PRJNA939370 | 540 | 394 | 0.910145 | 3.5859713 | Limisphaerales bacterium | 2052186 | Bacteria | Bacteria | 48.1 | 0.00161 | NR | MFN3407990.1 | 2052186 | g488 | i0 | 43.6 | 0.418781725888325 | 55 | 28 | 41.1 | 2 | 225 | 386 | 90 | 142 | MFN3407990.1 carotenoid biosynthesis protein [Limisphaerales bacterium] | diamond | 165 | 48.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Limisphaerales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;