RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA939369", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA939369 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7634254 7634254 PRJNA939369_S_NODE_64786_length_246_cov_1.202312_g64369_i0 PRJNA939369 64786 246 1.202312 2.95768752 Thermoproteati 1783275 Archaea Archaea 449 6.74e-122   NTclustered gi|1276742682|gb|KY388028.1| 29281 g64369 i0 99.593 99.6544715447154 246 1 100 0 1 246 278 33 Uncultured crenarchaeote clone 2012JulP9S33 ammonia monooxygenase subunit A (amoA) gene, partial cds blastn 24515 449 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
22591686 22591686 PRJNA939369_S_NODE_80798_length_199_cov_62.492063_g80381_i0 PRJNA939369 80798 199 62.492063 124.35920537 Vulcanisaeta moutnovskia 985052 Archaea Archaea 52.8 0.017   NTclustered gi|323706731|gb|CP002529.1| 985053 g80381 i0 100 0.14070351758794 28 0 14 0 152 179 336100 336127 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;