RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA939369", tax_phylum = "Lenarviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Lenarviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA939369 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2189785 2189785 PRJNA939369_S_NODE_502_length_1483_cov_5.260993_g296_i0 PRJNA939369 502 1483 5.260993 78.02052619 Fiersviridae 2842319 Viruses Viruses 85.9 8.56e-14   NR YP_010771401.1 2786414 g296 i0 25.4 1.50101146325017 311 211 59.7 7 446 1330 184 489 YP_010771401.1 maturation protein [ssRNA phage SRR5466725_16] diamond 2226 86.7 0.990772779700115 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae Grendvuvirus Grendvuvirus asiocola
30309868 30309868 PRJNA939369_S_NODE_312_length_1918_cov_3.566938_g165_i0 PRJNA939369 312 1918 3.566938 68.41387084 Leviviridae sp. 2027243 Viruses Viruses 245 1.18e-71   NR URG16217.1 2027243 g165 i0 42.9 2.32429614181439 345 177 52.6 7 561 1568 3 336 URG16217.1 MAG: RNA dependent RNA polymerase, partial [Leviviridae sp.] diamond 4458 245 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.
32403244 32403244 PRJNA939369_S_NODE_62139_length_248_cov_0.880000_g61722_i0 PRJNA939369 62139 248 0.88 2.1824 Konmavirus 2842809 Viruses Viruses 68.6 3.17e-11   NR YP_010770188.1 2786682 g61722 i0 50.7 1.79032258064516 69 34 83.5 0 229 23 300 368 YP_010770188.1 RNA-directed RNA polymerase [ssRNA phage SRR7976310_4] diamond 444 68.9 0.995645863570392 Viruses   Orthornavirae Lenarviricota Leviviricetes Timlovirales Blumeviridae Konmavirus Konmavirus peladaptatum
32774707 32774707 PRJNA939369_S_NODE_28300_length_306_cov_0.939914_g27883_i0 PRJNA939369 28300 306 0.939914 2.87613684 Leviviridae sp. 2027243 Viruses Viruses 79.3 1.08e-14   NR UJQ85467.1 2027243 g27883 i0 48.1 1.54901960784314 79 41 77.5 0 239 3 294 372 UJQ85467.1 MAG: hypothetical protein 3 [Leviviridae sp.] diamond 474 79.3 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;