RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA939369" and tax_phylum = "Candidatus Sumerlaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sumerlaeota · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA939369 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27530537 27530537 PRJNA939369_S_NODE_30203_length_300_cov_1.356828_g29786_i0 PRJNA939369 30203 300 1.356828 4.070484 Candidatus Sumerlaeales bacterium 2925322 Bacteria Bacteria 52.8 2.25e-5   NR MDD4279651.1 2925322 g29786 i0 39.2 0.74 74 44 74 1 298 77 1414 1486 MDD4279651.1 hypothetical protein [Candidatus Sumerlaeales bacterium] diamond 222 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales     Candidatus Sumerlaeales bacterium
27720500 27720500 PRJNA939369_S_NODE_4944_length_545_cov_1.131356_g4529_i0 PRJNA939369 4944 545 1.131356 6.1658902 Candidatus Sumerlaeales bacterium 2925322 Bacteria Bacteria 214 1.61e-63   NR MDD4280097.1 2925322 g4529 i0 54.7 2.90642201834862 172 78 94.7 0 1 516 234 405 MDD4280097.1 hypothetical protein [Candidatus Sumerlaeales bacterium] diamond 1584 214 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales     Candidatus Sumerlaeales bacterium
29330248 29330248 PRJNA939369_S_NODE_29509_length_302_cov_1.336245_g29092_i0 PRJNA939369 29509 302 1.336245 4.0354599 Candidatus Sumerlaeales bacterium 2925322 Bacteria Bacteria 98.2 1.9300000000000001e-22   NR MDD4279375.1 2925322 g29092 i0 52 1.98675496688742 100 48 99.3 0 1 300 60 159 MDD4279375.1 hypothetical protein [Candidatus Sumerlaeales bacterium] diamond 600 98.2 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales     Candidatus Sumerlaeales bacterium
30846524 30846524 PRJNA939369_S_NODE_51874_length_255_cov_1.269231_g51457_i0 PRJNA939369 51874 255 1.269231 3.23653905 Candidatus Sumerlaeales bacterium 2925322 Bacteria Bacteria 70.1 4.68e-12   NR MDD4279210.1 2925322 g51457 i0 49.3 0.882352941176471 75 38 88.2 0 30 254 46 120 MDD4279210.1 tyrosine-type recombinase/integrase [Candidatus Sumerlaeales bacterium] diamond 225 70.1 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales     Candidatus Sumerlaeales bacterium
31858152 31858152 PRJNA939369_S_NODE_12077_length_398_cov_1.212308_g11660_i0 PRJNA939369 12077 398 1.212308 4.82498584 Candidatus Sumerlaeales bacterium 2925322 Bacteria Bacteria 136 1.03e-35   NR MDD4280132.1 2925322 g11660 i0 49.6 0.987437185929648 131 66 98.7 0 3 395 73 203 MDD4280132.1 hypothetical protein [Candidatus Sumerlaeales bacterium] diamond 393 136 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales     Candidatus Sumerlaeales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;