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contig_metadata

23 rows where bioproject = "PRJNA939369", tax_kingdom = "Orthornavirae" and tax_phylum = "Pisuviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 23 ✖

tax_kingdom 1

  • Orthornavirae · 23 ✖

bioproject 1

  • PRJNA939369 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3465134 3465134 PRJNA939369_S_NODE_33223_length_292_cov_1.100457_g32806_i0 PRJNA939369 33223 292 1.100457 3.21333444 Camellia sinensis secoviridae virus 1 2957729 Viruses Viruses 199 7.429999999999999e-57   NR USS99170.1 2957729 g32806 i0 95.8 6.9041095890411 96 4 98.6 0 3 290 1779 1874 USS99170.1 polyprotein [Camellia sinensis secoviridae virus 1] diamond 2016 199 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae   Camellia sinensis secoviridae virus 1
4742565 4742565 PRJNA939369_S_NODE_18844_length_344_cov_1.369004_g18427_i0 PRJNA939369 18844 344 1.369004 4.70937376 Penaeus vannamei solinvivirus 2973956 Viruses Viruses 499 9.67e-137   NTclustered gi|2304762575|gb|OP265432.1| 2973956 g18427 i0 93.003 30.2122093023256 343 22 99 2 1 342 342 1 Penaeus vannamei solinvivirus isolate 20-905-APL polyprotein gene, complete cds blastn 10393 499 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Solinviviridae   Penaeus vannamei solinvivirus
4742917 4742917 PRJNA939369_S_NODE_68384_length_245_cov_0.877907_g67967_i0 PRJNA939369 68384 245 0.877907 2.15087215 Betacoronavirus pandemicum 3418604 Viruses Viruses 63.9 1.02e-5   NTclustered gi|2557634435|emb|OY691424.1| 2697049 g67967 i0 97.297 14.9102040816327 37 1 15 0 209 245 7552 7588 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 3653 63.9 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
9842171 9842171 PRJNA939369_S_NODE_10288_length_420_cov_1.832853_g9871_i0 PRJNA939369 10288 420 1.832853 7.6979826 Picobirnavirus sp. 1907787 Viruses Viruses 339 2.77e-88   NTclustered gi|2071757898|gb|MW930290.1| 1907787 g9871 i0 81.598 5.15238095238095 413 73 98 3 10 420 1150 1561 MAG: Picobirnavirus sp. isolate XZ28 RNA-dependent RNA-polymerase gene, complete cds blastn 2164 339 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae Orthopicobirnavirus Picobirnavirus sp.
11118266 11118266 PRJNA939369_S_NODE_75549_length_241_cov_0.958333_g75132_i0 PRJNA939369 75549 241 0.958333 2.30958253 Betacoronavirus pandemicum 3418604 Viruses Viruses 122 1.6299999999999994e-23   NTclustered gi|2165834194|emb|OV195900.1| 2697049 g75132 i0 96.053 29.8132780082988 76 1 31 2 5 79 30066 29992 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 7185 122 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
12393364 12393364 PRJNA939369_S_NODE_10710_length_414_cov_3.533724_g10293_i0 PRJNA939369 10710 414 3.533724 14.62961736 Porcine bastrovirus 2588662 Viruses Viruses 56.5 0.003   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g10293 i0 100 0.140096618357488 30 0 7 0 385 414 42 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
13668039 13668039 PRJNA939369_S_NODE_49491_length_259_cov_0.994624_g49074_i0 PRJNA939369 49491 259 0.994624 2.57607616 Betacoronavirus pandemicum 3418604 Viruses Viruses 62.1 3.92e-5   NTclustered gi|2557633336|emb|OY694998.1| 2697049 g49074 i0 97.222 1.78378378378378 36 1 14 0 7 42 19685 19650 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 462 62.1 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
16217224 16217224 PRJNA939369_S_NODE_2453_length_716_cov_1.819596_g2069_i0 PRJNA939369 2453 716 1.819596 13.02830736 Picobirnavirus sp. 1907787 Viruses Viruses 370 2.84e-123   NR QXV86716.1 1907787 g2069 i0 75.2 0.99720670391061506 238 59 99.7 0 714 1 130 367 QXV86716.1 MAG: RNA-dependent RNA-polymerase [Picobirnavirus sp.] diamond 714 370 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae Orthopicobirnavirus Picobirnavirus sp.
17492562 17492562 PRJNA939369_S_NODE_24554_length_318_cov_1.800000_g24137_i0 PRJNA939369 24554 318 1.8 5.724 Porcine picobirnavirus 442302 Viruses Viruses 278 4.52e-70   NTclustered gi|2095880661|gb|MW978536.1| 442302 g24137 i0 88.938 63.2421383647799 226 24 71 1 1 225 2667 2892 MAG: Porcine picobirnavirus isolate 15217_NODE_84_len_2958_cov_626.749569 hypothetical protein and capsid protein-like gene, partial sequence blastn 20111 278 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae Orthopicobirnavirus Porcine picobirnavirus
20041025 20041025 PRJNA939369_S_NODE_42016_length_272_cov_2.216080_g41599_i0 PRJNA939369 42016 272 2.21608 6.0277376 Porcine bastrovirus 2588662 Viruses Viruses 56.5 0.002   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g41599 i0 100 0.213235294117647 30 0 11 0 243 272 42 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
21316231 21316231 PRJNA939369_S_NODE_1117_length_990_cov_2.451472_g809_i0 PRJNA939369 1117 990 2.451472 24.2695728 Orthopicobirnavirus 2948851 Viruses Viruses 425 1.2599999999999996e-143   NR USE08238.1 1907787 g809 i0 63.5 4.85151515151515 329 115 99.1 2 981 1 124 449 USE08238.1 MAG: putative RNA-dependent RNA polymerase, partial [Picobirnavirus sp.] diamond 4803 429 0.990675990675991 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae Orthopicobirnavirus Picobirnavirus sp.
21316247 21316247 PRJNA939369_S_NODE_13997_length_379_cov_1.258170_g13580_i0 PRJNA939369 13997 379 1.25817 4.7684643 Stralarivirus lychnis 3052754 Viruses Viruses 281 4.23e-71   NTclustered gi|2500669232|ref|NC_078686.1| 1676256 g13580 i0 82.5 3.83641160949868 320 56 84 0 19 338 1146 827 Lychnis mottle virus isolate Andong segment RNA2, complete sequence blastn 1454 281 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Stralarivirus Stralarivirus lychnis
21316524 21316524 PRJNA939369_S_NODE_55577_length_251_cov_0.865169_g55160_i0 PRJNA939369 55577 251 0.865169 2.17157419 Betacoronavirus pandemicum 3418604 Viruses Viruses 126 1.32e-24   NTclustered gi|2155043488|emb|OV016109.1| 2697049 g55160 i0 96.154 28.9043824701195 78 1 30 2 2 77 30068 29991 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 7255 126 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
23866633 23866633 PRJNA939369_S_NODE_20759_length_334_cov_1.555556_g20342_i0 PRJNA939369 20759 334 1.555556 5.19555704 Penaeus vannamei solinvivirus 2973956 Viruses Viruses 484 2.6199999999999996e-132   NTclustered gi|2304762575|gb|OP265432.1| 2973956 g20342 i0 92.814 30.3023952095808 334 24 100 0 1 334 4008 3675 Penaeus vannamei solinvivirus isolate 20-905-APL polyprotein gene, complete cds blastn 10121 484 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Solinviviridae   Penaeus vannamei solinvivirus
25140545 25140545 PRJNA939369_S_NODE_48840_length_260_cov_1.053476_g48423_i0 PRJNA939369 48840 260 1.053476 2.7390376 Betacoronavirus pandemicum 3418604 Viruses Viruses 117 8.28e-22   NTclustered gi|2165837646|emb|OV197539.1| 2697049 g48423 i0 93.671 34.55 79 3 30 2 3 80 29948 29871 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 8983 117 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
25482569 25482569 PRJNA939369_S_NODE_11000_length_411_cov_1.594675_g10583_i0 PRJNA939369 11000 411 1.594675 6.55411425 Viruses 10239 Viruses Viruses 477 5.4999999999999985e-130   NTclustered gi|2677147979|gb|OR996055.1| 2665152 g10583 i0 87.99 60.1849148418491 408 44 99 5 4 408 3713 3308 MAG: Cnidium vein yellowing virus isolate Jinan segment RNA2, complete sequence blastn 24736 477 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Cnidium vein yellowing virus
27031900 27031900 PRJNA939369_S_NODE_72902_length_242_cov_2.201183_g72485_i0 PRJNA939369 72902 242 2.201183 5.32686286 Orthopicobirnavirus 2948851 Viruses Viruses 122 1.25e-30   NR UAW00543.1 442302 g72485 i0 75.3 1.92148760330579 77 19 95.5 0 1 231 44 120 UAW00543.1 MAG: RNA-dependent RNA polymerase [Porcine picobirnavirus] diamond 465 123 0.991869918699187 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae Orthopicobirnavirus Porcine picobirnavirus
28098810 28098810 PRJNA939369_S_NODE_33225_length_292_cov_1.073059_g32808_i0 PRJNA939369 33225 292 1.073059 3.13333228 Marmot picobirnavirus 2161795 Viruses Viruses 61.2 9.35e-9   NR AVX53416.1 2161795 g32808 i0 46.6 0.75 73 39 75 0 68 286 121 193 AVX53416.1 putative ORF1 [Marmot picobirnavirus] diamond 219 61.2 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae Orthopicobirnavirus Marmot picobirnavirus
29930423 29930423 PRJNA939369_S_NODE_20291_length_336_cov_2.148289_g19874_i0 PRJNA939369 20291 336 2.148289 7.21825104 Marmot picobirnavirus 2161795 Viruses Viruses 94.4 3.9e-21   NR AVX53416.1 2161795 g19874 i0 63.8 0.714285714285714 80 29 71.4 0 37 276 14 93 AVX53416.1 putative ORF1 [Marmot picobirnavirus] diamond 240 94.4 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae Orthopicobirnavirus Marmot picobirnavirus
30909811 30909811 PRJNA939369_S_NODE_2654_length_694_cov_1.975845_g2260_i0 PRJNA939369 2654 694 1.975845 13.7123643 Marmot picobirnavirus 2161795 Viruses Viruses 102 3.96e-21   NR AVX53395.1 2161795 g2260 i0 35.8 2.48991354466859 162 91 70 2 497 12 44 192 AVX53395.1 putative capsid [Marmot picobirnavirus] diamond 1728 102 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae Orthopicobirnavirus Marmot picobirnavirus
30948484 30948484 PRJNA939369_S_NODE_6854_length_484_cov_1.423358_g6437_i0 PRJNA939369 6854 484 1.423358 6.88905272 Stralarivirus 2948915 Viruses Viruses 184 1.06e-50   NR BBG58107.1 1676255 g6437 i0 95.7 2.87603305785124 93 4 57.6 0 484 206 450 542 BBG58107.1 polyprotein, partial [Cnidium vein yellowing virus 2] diamond 1392 184 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Cnidium vein yellowing virus 2
31320476 31320476 PRJNA939369_S_NODE_1035_length_1027_cov_1.708595_g749_i0 PRJNA939369 1035 1027 1.708595 17.54727065 Marmot picobirnavirus 2161795 Viruses Viruses 319 2.15e-102   NR AVX53417.1 2161795 g749 i0 49.6 0.984420642648491 337 160 96.4 5 3 992 115 448 AVX53417.1 putative capsid, partial [Marmot picobirnavirus] diamond 1011 319 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae Orthopicobirnavirus Marmot picobirnavirus
31889823 31889823 PRJNA939369_S_NODE_197_length_2435_cov_6.287045_g83_i0 PRJNA939369 197 2435 6.287045 153.08954575 Marmot picobirnavirus 2161795 Viruses Viruses 414 4.68e-133   NR AVX53417.1 2161795 g83 i0 48.2 0.590143737166324 479 221 57.4 9 1399 2 2 466 AVX53417.1 putative capsid, partial [Marmot picobirnavirus] diamond 1437 414 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae Orthopicobirnavirus Marmot picobirnavirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;