contig_metadata
18 rows where bioproject = "PRJNA939369", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8567555 | 8567555 | PRJNA939369_S_NODE_75087_length_241_cov_1.821429_g74670_i0 | PRJNA939369 | 75087 | 241 | 1.821429 | 4.38964389 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 412 | 8.64e-111 | NTclustered | gi|2874254019|emb|OY970344.1| | 412056 | g74670 | i0 | 97.51 | 112.423236514523 | 241 | 6 | 100 | 0 | 1 | 241 | 735640 | 735880 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1 | blastn | 27094 | 412 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 8908872 | 8908872 | PRJNA939369_S_NODE_18967_length_343_cov_2.959259_g18550_i0 | PRJNA939369 | 18967 | 343 | 2.959259 | 10.15025837 | Akkermansia | 239934 | Bacteria | Bacteria | 573 | 5.599999999999998e-159 | NTclustered | gi|2051360498|gb|CP072032.1| | 239935 | g18550 | i0 | 96.793 | 296 | 343 | 11 | 100 | 0 | 1 | 343 | 395293 | 394951 | Akkermansia muciniphila strain Akk1613 chromosome, complete genome | blastn | 101528 | 573 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 9842216 | 9842216 | PRJNA939369_S_NODE_19488_length_340_cov_2.741573_g19071_i0 | PRJNA939369 | 19488 | 340 | 2.741573 | 9.3213482 | Rubellicoccus peritrichatus | 3080537 | Bacteria | Bacteria | 309 | 1.7300000000000003e-79 | NTclustered | gi|2605121622|gb|CP136920.1| | 3080537 | g19071 | i0 | 83.988 | 184.055882352941 | 331 | 43 | 96 | 9 | 1 | 326 | 2161657 | 2161982 | Rubellicoccus peritrichatus strain CR14 isolate coral tank chromosome, complete genome | blastn | 62579 | 309 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Cerasicoccaceae | Rubellicoccus | Rubellicoccus peritrichatus | |
| 9842458 | 9842458 | PRJNA939369_S_NODE_54848_length_251_cov_0.865169_g54431_i0 | PRJNA939369 | 54848 | 251 | 0.865169 | 2.17157419 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 176 | 7.08e-51 | NR | HCG20426.1 | 2026799 | g54431 | i0 | 95.2 | 19.8406374501992 | 83 | 4 | 99.2 | 0 | 250 | 2 | 10 | 92 | HCG20426.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B [Verrucomicrobiota bacterium] | diamond | 4980 | 177 | 0.994350282485876 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 13667855 | 13667855 | PRJNA939369_S_NODE_18671_length_345_cov_1.470588_g18254_i0 | PRJNA939369 | 18671 | 345 | 1.470588 | 5.0735286 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 363 | 1.33e-95 | NTclustered | gi|2225500096|gb|CP095464.1| | 2026799 | g18254 | i0 | 87.077 | 331.91884057971 | 325 | 36 | 93 | 6 | 1 | 322 | 594236 | 594557 | MAG: Verrucomicrobia bacterium isolate LL51 chromosome, complete genome | blastn | 114512 | 363 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 14942427 | 14942427 | PRJNA939369_S_NODE_61652_length_248_cov_0.880000_g61235_i0 | PRJNA939369 | 61652 | 248 | 0.88 | 2.1824 | uncultured Opitutaceae bacterium | 333967 | Bacteria | Bacteria | 106 | 1.7e-18 | NTclustered | gi|2518551946|emb|OX638348.1| | 333967 | g61235 | i0 | 75.833 | 4.23387096774194 | 240 | 41 | 94 | 15 | 16 | 248 | 4609834 | 4609605 | MAG: uncultured Opitutaceae bacterium isolate b1b57f99-08c0-43d1-969e-fd0ef39b1292 genome assembly, chromosome: 1 | blastn | 1050 | 106 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | uncultured Opitutaceae bacterium | ||
| 16558579 | 16558579 | PRJNA939369_S_NODE_3933_length_593_cov_4.084615_g3527_i0 | PRJNA939369 | 3933 | 593 | 4.084615 | 24.22176695 | Akkermansia | 239934 | Bacteria | Bacteria | 1085 | 0 | NTclustered | gi|1888387165|gb|CP058562.1| | 239935 | g3527 | i0 | 99.663 | 296 | 593 | 2 | 100 | 0 | 1 | 593 | 137908 | 137316 | Akkermansia muciniphila strain AK32 chromosome, complete genome | blastn | 175528 | 1085 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 18766104 | 18766104 | PRJNA939369_S_NODE_43235_length_270_cov_1.172589_g42818_i0 | PRJNA939369 | 43235 | 270 | 1.172589 | 3.1659903 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 346 | 1.01e-90 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g42818 | i0 | 90.637 | 127.751851851852 | 267 | 15 | 97 | 7 | 4 | 264 | 1316478 | 1316740 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 34493 | 346 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 20041227 | 20041227 | PRJNA939369_S_NODE_73236_length_242_cov_1.284024_g72819_i0 | PRJNA939369 | 73236 | 242 | 1.284024 | 3.10733808 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 392 | 1.1299999999999999e-104 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g72819 | i0 | 95.885 | 204.107438016529 | 243 | 8 | 100 | 2 | 1 | 242 | 1315546 | 1315787 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 49394 | 392 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 21316420 | 21316420 | PRJNA939369_S_NODE_41157_length_274_cov_1.437811_g40740_i0 | PRJNA939369 | 41157 | 274 | 1.437811 | 3.93960214 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 368 | 2.1999999999999996e-97 | NTclustered | gi|2225500096|gb|CP095464.1| | 2026799 | g40740 | i0 | 91.144 | 133.890510948905 | 271 | 24 | 99 | 0 | 4 | 274 | 594369 | 594639 | MAG: Verrucomicrobia bacterium isolate LL51 chromosome, complete genome | blastn | 36686 | 368 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 21316439 | 21316439 | PRJNA939369_S_NODE_43297_length_270_cov_1.126904_g42880_i0 | PRJNA939369 | 43297 | 270 | 1.126904 | 3.0426408 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 291 | 4.82e-74 | NTclustered | gi|2225500096|gb|CP095464.1| | 2026799 | g42880 | i0 | 86.296 | 159.3 | 270 | 34 | 100 | 3 | 1 | 270 | 594661 | 594927 | MAG: Verrucomicrobia bacterium isolate LL51 chromosome, complete genome | blastn | 43011 | 291 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 26993089 | 26993089 | PRJNA939369_S_NODE_17402_length_353_cov_1.082143_g16985_i0 | PRJNA939369 | 17402 | 353 | 1.082143 | 3.81996479 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 97.8 | 6.680000000000001e-21 | NR | MBR6464573.1 | 2026799 | g16985 | i0 | 47.9 | 1.01133144475921 | 119 | 54 | 99.4 | 4 | 2 | 352 | 390 | 502 | MBR6464573.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 357 | 97.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27024981 | 27024981 | PRJNA939369_S_NODE_21642_length_330_cov_1.322957_g21225_i0 | PRJNA939369 | 21642 | 330 | 1.322957 | 4.3657581 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 43.5 | 0.049 | NR | MBK9989404.1 | 2026799 | g21225 | i0 | 41.7 | 0.654545454545455 | 72 | 37 | 61.8 | 4 | 5 | 208 | 263 | 333 | MBK9989404.1 homocysteine S-methyltransferase family protein [Verrucomicrobiota bacterium] | diamond | 216 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28067288 | 28067288 | PRJNA939369_S_NODE_31025_length_298_cov_1.026667_g30608_i0 | PRJNA939369 | 31025 | 298 | 1.026667 | 3.05946766 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 157 | 3.99e-42 | NR | MBR6464573.1 | 2026799 | g30608 | i0 | 63.6 | 0.996644295302013 | 99 | 36 | 99.7 | 0 | 297 | 1 | 721 | 819 | MBR6464573.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 297 | 157 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28919639 | 28919639 | PRJNA939369_S_NODE_13908_length_380_cov_1.205212_g13491_i0 | PRJNA939369 | 13908 | 380 | 1.205212 | 4.5798056 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 82.4 | 6.77e-16 | NR | MBR6464572.1 | 2026799 | g13491 | i0 | 38.2 | 1.03421052631579 | 131 | 74 | 97.9 | 3 | 380 | 9 | 18 | 148 | MBR6464572.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 393 | 82.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 29677239 | 29677239 | PRJNA939369_S_NODE_66850_length_245_cov_1.296512_g66433_i0 | PRJNA939369 | 66850 | 245 | 1.296512 | 3.1764544 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 100 | 2.49e-22 | NR | MBR6464573.1 | 2026799 | g66433 | i0 | 56.3 | 0.979591836734694 | 80 | 35 | 98 | 0 | 243 | 4 | 307 | 386 | MBR6464573.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 240 | 100 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30151123 | 30151123 | PRJNA939369_S_NODE_2232_length_746_cov_3.326895_g1851_i0 | PRJNA939369 | 2232 | 746 | 3.326895 | 24.8186367 | Akkermansia sp. | 1872421 | Bacteria | Bacteria | 127 | 1.1399999999999999e-32 | NR | MBR3927256.1 | 1872421 | g1851 | i0 | 38.2 | 0.715817694369973 | 178 | 110 | 71.6 | 0 | 205 | 738 | 1 | 178 | MBR3927256.1 hypothetical protein [Akkermansia sp.] | diamond | 534 | 127 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia sp. | |
| 30530450 | 30530450 | PRJNA939369_S_NODE_65813_length_246_cov_0.890173_g65396_i0 | PRJNA939369 | 65813 | 246 | 0.890173 | 2.18982558 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 140 | 1.65e-36 | NR | MBR6464573.1 | 2026799 | g65396 | i0 | 79 | 0.98780487804878 | 81 | 17 | 98.8 | 0 | 244 | 2 | 16 | 96 | MBR6464573.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 243 | 140 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;