contig_metadata
14 rows where bioproject = "PRJNA939369", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3465253 | 3465253 | PRJNA939369_S_NODE_5383_length_528_cov_4.575824_g4967_i0 | PRJNA939369 | 5383 | 528 | 4.575824 | 24.16035072 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 795 | 0 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g4967 | i0 | 93.785 | 77.907196969697 | 531 | 30 | 100 | 3 | 1 | 528 | 2002824 | 2003354 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 41135 | 795 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 8908881 | 8908881 | PRJNA939369_S_NODE_22207_length_327_cov_2.791339_g21790_i0 | PRJNA939369 | 22207 | 327 | 2.791339 | 9.12767853 | Gemmataceae | 1914233 | Bacteria | Bacteria | 453 | 7.210000000000001e-123 | NTclustered | gi|1727537522|gb|CP042911.1| | 114 | g21790 | i0 | 91.743 | 130.834862385321 | 327 | 25 | 100 | 2 | 1 | 327 | 1034777 | 1035101 | Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome | blastn | 42783 | 455 | 0.995604395604396 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 16217244 | 16217244 | PRJNA939369_S_NODE_2833_length_674_cov_5.935108_g2437_i0 | PRJNA939369 | 2833 | 674 | 5.935108 | 40.00262792 | Frigoriglobus tundricola | 2774151 | Bacteria | Bacteria | 1201 | 0 | NTclustered | gi|1870286614|gb|CP053452.2| | 2774151 | g2437 | i0 | 98.813 | 119.197329376855 | 674 | 8 | 100 | 0 | 1 | 674 | 1092265 | 1092938 | Frigoriglobus tundricola strain PL17 chromosome, complete genome | blastn | 80339 | 1201 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Frigoriglobus | Frigoriglobus tundricola | |
| 18766313 | 18766313 | PRJNA939369_S_NODE_68755_length_244_cov_1.426901_g68338_i0 | PRJNA939369 | 68755 | 244 | 1.426901 | 3.48163844 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 200 | 7.4299999999999985e-47 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g68338 | i0 | 81.855 | 89.0081967213115 | 248 | 36 | 100 | 6 | 1 | 244 | 1866433 | 1866675 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 21718 | 200 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 21316265 | 21316265 | PRJNA939369_S_NODE_16157_length_361_cov_1.479167_g15740_i0 | PRJNA939369 | 16157 | 361 | 1.479167 | 5.33979287 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 623 | 5.779999999999999e-174 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g15740 | i0 | 97.784 | 137.02216066482 | 361 | 8 | 100 | 0 | 1 | 361 | 2003835 | 2003475 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 49465 | 623 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 21658318 | 21658318 | PRJNA939369_S_NODE_2057_length_769_cov_4.298851_g1685_i0 | PRJNA939369 | 2057 | 769 | 4.298851 | 33.05816419 | Gemmataceae | 1914233 | Bacteria | Bacteria | 1254 | 0 | NTclustered | gi|1804905141|emb|LR593886.1| | 1210884 | g1685 | i0 | 96.224 | 174.561768530559 | 768 | 25 | 99 | 3 | 1 | 766 | 3634444 | 3633679 | Gemmata massiliana isolate Soil9 genome assembly, chromosome: 1 | blastn | 134238 | 1260 | 0.995238095238095 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata massiliana | |
| 26835258 | 26835258 | PRJNA939369_S_NODE_44641_length_267_cov_1.582474_g44224_i0 | PRJNA939369 | 44641 | 267 | 1.582474 | 4.22520558 | Thermoguttaceae bacterium | 2691551 | Bacteria | Bacteria | 94.4 | 7.4e-22 | NR | MBO5437458.1 | 2691551 | g44224 | i0 | 81.5 | 0.606741573033708 | 54 | 10 | 60.7 | 0 | 2 | 163 | 140 | 193 | MBO5437458.1 HK97 family phage prohead protease [Thermoguttaceae bacterium] | diamond | 162 | 94.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Thermoguttaceae | Thermoguttaceae bacterium | ||
| 27095191 | 27095191 | PRJNA939369_S_NODE_67602_length_245_cov_0.895349_g67185_i0 | PRJNA939369 | 67602 | 245 | 0.895349 | 2.19360505 | root | 1 | Root_unresolved | Root_unresolved | 70.1 | 5.84e-12 | NR | MBI68501.1 | 2026778 | g67185 | i0 | 66 | 1.1265306122449 | 47 | 16 | 57.6 | 0 | 1 | 141 | 260 | 306 | MBI68501.1 hypothetical protein [Phycisphaerae bacterium] | diamond | 276 | 70.5 | 0.994326241134752 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 27530536 | 27530536 | PRJNA939369_S_NODE_24963_length_317_cov_0.946721_g24546_i0 | PRJNA939369 | 24963 | 317 | 0.946721 | 3.00110557 | Thermoguttaceae bacterium | 2691551 | Bacteria | Bacteria | 98.2 | 4.0799999999999996e-23 | NR | MBQ2850058.1 | 2691551 | g24546 | i0 | 58.7 | 2.12933753943218 | 75 | 31 | 71 | 0 | 309 | 85 | 115 | 189 | MBQ2850058.1 hypothetical protein [Thermoguttaceae bacterium] | diamond | 675 | 98.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Thermoguttaceae | Thermoguttaceae bacterium | ||
| 28667367 | 28667367 | PRJNA939369_S_NODE_32827_length_293_cov_1.222727_g32410_i0 | PRJNA939369 | 32827 | 293 | 1.222727 | 3.58259011 | Thermoguttaceae bacterium | 2691551 | Bacteria | Bacteria | 44.3 | 0.0133 | NR | MBR0225112.1 | 2691551 | g32410 | i0 | 48.6 | 0.747440273037543 | 37 | 19 | 37.9 | 0 | 178 | 288 | 6 | 42 | MBR0225112.1 hypothetical protein [Thermoguttaceae bacterium] | diamond | 219 | 44.3 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Thermoguttaceae | Thermoguttaceae bacterium | ||
| 29014857 | 29014857 | PRJNA939369_S_NODE_72588_length_243_cov_0.888235_g72171_i0 | PRJNA939369 | 72588 | 243 | 0.888235 | 2.15841105 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 43.5 | 0.0197 | NR | MCC6321303.1 | 2052180 | g72171 | i0 | 38.2 | 0.839506172839506 | 68 | 41 | 82.7 | 1 | 220 | 20 | 96 | 163 | MCC6321303.1 S8 family serine peptidase [Phycisphaerales bacterium] | diamond | 204 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 29898761 | 29898761 | PRJNA939369_S_NODE_68831_length_244_cov_1.350877_g68414_i0 | PRJNA939369 | 68831 | 244 | 1.350877 | 3.29613988 | Thermoguttaceae bacterium | 2691551 | Bacteria | Bacteria | 65.5 | 3.8e-10 | NR | MBQ9372152.1 | 2691551 | g68414 | i0 | 45.8 | 1.02049180327869 | 83 | 41 | 99.6 | 3 | 243 | 1 | 481 | 561 | MBQ9372152.1 fibronectin type III domain-containing protein [Thermoguttaceae bacterium] | diamond | 249 | 65.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Thermoguttaceae | Thermoguttaceae bacterium | ||
| 30885089 | 30885089 | PRJNA939369_S_NODE_73714_length_242_cov_0.911243_g73297_i0 | PRJNA939369 | 73714 | 242 | 0.911243 | 2.20520806 | Bacteria | 2 | Bacteria | Bacteria | 80.1 | 2.55e-15 | NR | MDP7254702.1 | 2026780 | g73297 | i0 | 50.6 | 7.5495867768595 | 87 | 35 | 97.9 | 2 | 237 | 1 | 559 | 645 | MDP7254702.1 Mu-like prophage major head subunit gpT family protein [Planctomycetota bacterium] | diamond | 1827 | 80.9 | 0.990111248454882 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31036347 | 31036347 | PRJNA939369_S_NODE_27055_length_310_cov_0.869198_g26638_i0 | PRJNA939369 | 27055 | 310 | 0.869198 | 2.6945138 | Phycisphaerae bacterium | 2026778 | Bacteria | Bacteria | 43.5 | 0.0103 | NR | MAO23689.1 | 2026778 | g26638 | i0 | 38.7 | 0.725806451612903 | 75 | 35 | 64.8 | 3 | 208 | 8 | 1 | 72 | MAO23689.1 hypothetical protein [Phycisphaerae bacterium] | diamond | 225 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;