contig_metadata
5 rows where bioproject = "PRJNA938397" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6016316 | 6016316 | PRJNA938397_S_NODE_30545_length_199_cov_24.209877_g30304_i0 | PRJNA938397 | 30545 | 199 | 24.209877 | 48.17765523 | Aphanomyces brasiliensis | 2525538 | SAR_Eukaryotes | SAR_Eukaryotes | 368 | 1.51e-97 | NTclustered | gi|2098511708|gb|OK235679.1| | 2525538 | g30304 | i0 | 100 | 100.381909547739 | 199 | 0 | 100 | 0 | 1 | 199 | 748 | 550 | Aphanomyces brasiliensis voucher CCIBt4545 small subunit ribosomal RNA gene, partial sequence | blastn | 19976 | 368 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces brasiliensis | ||
| 23864802 | 23864802 | PRJNA938397_S_NODE_14699_length_285_cov_24.556452_g14458_i0 | PRJNA938397 | 14699 | 285 | 24.556452 | 69.9858882 | Aphanomyces stellatus | 120398 | SAR_Eukaryotes | SAR_Eukaryotes | 518 | 2.16e-142 | NTclustered | gi|363498776|gb|JN662487.1| | 120398 | g14458 | i0 | 100 | 97.6842105263158 | 280 | 0 | 98 | 0 | 6 | 285 | 323 | 44 | Aphanomyces stellatus strain GF 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 27840 | 518 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces stellatus | ||
| 25482520 | 25482520 | PRJNA938397_S_NODE_22360_length_233_cov_19.265306_g22119_i0 | PRJNA938397 | 22360 | 233 | 19.265306 | 44.88816298 | Aphanomyces | 100860 | SAR_Eukaryotes | SAR_Eukaryotes | 363 | 8.479999999999997e-96 | NTclustered | gi|2099741709|gb|OK271022.1| | 253176 | g22119 | i0 | 99.005 | 86.2660944206009 | 201 | 2 | 86 | 0 | 32 | 232 | 920 | 720 | Aphanomyces cladogamus voucher CCIBt3854 small subunit ribosomal RNA gene, partial sequence | blastn | 20100 | 366 | 0.991803278688525 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces cladogamus | ||
| 26715051 | 26715051 | PRJNA938397_S_NODE_35181_length_186_cov_1.530201_g34940_i0 | PRJNA938397 | 35181 | 186 | 1.530201 | 2.84617386 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 63.9 | 5.53e-10 | NR | GLD94218.1 | 114742 | g34940 | i0 | 53.4 | 5.64516129032258 | 58 | 26 | 93.5 | 1 | 5 | 178 | 242 | 298 | GLD94218.1 hypothetical protein PINS_up002829 [Pythium insidiosum] | diamond | 1050 | 64.3 | 0.993779160186625 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium insidiosum | ||
| 28390014 | 28390014 | PRJNA938397_S_NODE_24346_length_224_cov_2.604278_g24105_i0 | PRJNA938397 | 24346 | 224 | 2.604278 | 5.83358272 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 78.2 | 5.16e-16 | NR | OQR96846.1 | 1202772 | g24105 | i0 | 73.5 | 5.27678571428571 | 49 | 13 | 65.6 | 0 | 216 | 70 | 119 | 167 | OQR96846.1 U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Achlya hypogyna] | diamond | 1182 | 78.6 | 0.994910941475827 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Achlya | Achlya hypogyna |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;