RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA938397", tax_kingdom = "Bacillati" and tax_phylum = "Actinomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Actinomycetota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA938397 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3463998 3463998 PRJNA938397_S_NODE_31243_length_197_cov_6.725000_g31002_i0 PRJNA938397 31243 197 6.725 13.24825 Actinomycetota bacterium 2900548 Bacteria Bacteria 80.5 1.01e-16   NR MDQ6746142.1 2900548 g31002 i0 76.7 0.654822335025381 43 10 65.5 0 4 132 158 200 MDQ6746142.1 peptide-methionine (S)-S-oxide reductase MsrA [Actinomycetota bacterium] diamond 129 80.5 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium
26676459 26676459 PRJNA938397_S_NODE_32041_length_194_cov_114.038217_g31800_i0 PRJNA938397 32041 194 114.038217 221.23414098 Thermoleophilaceae bacterium 2732252 Bacteria Bacteria 41.2 0.0389   NR HEX2071329.1 2732252 g31800 i0 51.3 0.603092783505155 39 17 60.3 1 1 117 57 93 HEX2071329.1 DUF6529 family protein [Thermoleophilaceae bacterium] diamond 117 41.2 1 Bacteria   Bacillati Actinomycetota Thermoleophilia Thermoleophilales Thermoleophilaceae   Thermoleophilaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;