RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA938397", tax_clade = "Sar" and tax_phylum = "Bacillariophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA938397 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7292242 7292242 PRJNA938397_S_NODE_8106_length_363_cov_10.604294_g7865_i0 PRJNA938397 8106 363 10.604294 38.49358722 Leptocylindrus aporus 1398097 SAR_Eukaryotes SAR_Eukaryotes 126 2e-24   NTclustered gi|541134824|gb|KC814833.1| 1398097 g7865 i0 86.957 31.2038567493113 115 11 31 4 1 114 311 200 Leptocylindrus aporus strain SZN-B651 28S ribosomal RNA gene, partial sequence blastn 11327 126 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Leptocylindrales Leptocylindraceae Leptocylindrus Leptocylindrus aporus
31549242 31549242 PRJNA938397_S_NODE_38156_length_178_cov_3.241135_g37915_i0 PRJNA938397 38156 178 3.241135 5.7692203 Stephanodiscaceae 1365474 SAR_Eukaryotes SAR_Eukaryotes 45.1 0.00233   NR KAL3764264.1 259834 g37915 i0 41.3 1.55056179775281 46 27 77.5 0 33 170 560 605 KAL3764264.1 hypothetical protein ACHAWU_004076 [Discostella pseudostelligera] diamond 276 45.1 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Discostella Discostella pseudostelligera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;