RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA937226", tax_phylum = "Preplasmiviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Preplasmiviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA937226 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11459533 11459533 PRJNA937226_S_NODE_17269_length_197_cov_2.459459_g17142_i0 PRJNA937226 17269 197 2.459459 4.84513423 root 1 Root_unresolved Root_unresolved 364 1.929999999999999e-96   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g17142 i0 100 100 197 0 100 0 1 197 4029 3833 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 19700 364 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
11459549 11459549 PRJNA937226_S_NODE_22749_length_176_cov_1.637795_g22622_i0 PRJNA937226 22749 176 1.637795 2.8825192 root 1 Root_unresolved Root_unresolved 124 3.0999999999999997e-24   NTclustered gi|1841985160|gb|MT277585.1| 10515 g22622 i0 93.902 45.6818181818182 82 5 47 0 95 176 31130 31049 Mutant Human adenovirus 2 isolate HAdV-C2-dE3B-CMV-GFP, complete sequence blastn 8040 124 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
12735183 12735183 PRJNA937226_S_NODE_3730_length_338_cov_2.508651_g3603_i0 PRJNA937226 3730 338 2.508651 8.47924038 root 1 Root_unresolved Root_unresolved 625 1.4999999999999999e-174   NTclustered gi|2288721861|gb|OP218818.1| 10535 g3603 i0 100 100.647928994083 338 0 100 0 1 338 2117 2454 Unidentified adenovirus strain CHOP Ad5 blastn 34019 625 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;