RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA937226" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA937226 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27119525 27119525 PRJNA937226_S_NODE_9182_length_250_cov_3.721393_g9055_i0 PRJNA937226 9182 250 3.721393 9.3034825 Chloroflexota bacterium 2026724 Bacteria Bacteria 44.7 0.00887   NR MBE9474112.1 2026724 g9055 i0 42.4 0.792 66 25 63.6 3 34 192 1371 1436 MBE9474112.1 glycosyltransferase family 39 protein [Chloroflexota bacterium] diamond 198 44.7 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27751777 27751777 PRJNA937226_S_NODE_14304_length_212_cov_2.141104_g14177_i0 PRJNA937226 14304 212 2.141104 4.53914048 Chloroflexota bacterium 2026724 Bacteria Bacteria 42 0.047   NR MBV9706402.1 2026724 g14177 i0 40 0.636792452830189 45 23 58 1 65 187 230 274 MBV9706402.1 hypothetical protein [Chloroflexota bacterium] diamond 135 42 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;