RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA937226", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 6 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 6 ✖

bioproject 1

  • PRJNA937226 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2531454 2531454 PRJNA937226_S_NODE_31302_length_152_cov_6.504854_g31175_i0 PRJNA937226 31302 152 6.504854 9.88737808 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 58.4 2.67e-4   NTclustered gi|2912987826|dbj|AP039592.1| 145626 g31175 i0 100 7.10526315789474 31 0 20 0 98 128 28635091 28635061 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 11, sequence blastn 1080 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
7290086 7290086 PRJNA937226_S_NODE_28586_length_161_cov_13.455357_g28459_i0 PRJNA937226 28586 161 13.455357 21.66312477 Bradybaena similaris 145626 Mollusca Mollusca 58.4 2.87e-4   NTclustered gi|2912990805|dbj|AP039595.1| 145626 g28459 i0 97.059 0.211180124223602 34 1 21 0 22 55 10542472 10542505 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 14, sequence blastn 34 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
13665549 13665549 PRJNA937226_S_NODE_9611_length_246_cov_7.568528_g9484_i0 PRJNA937226 9611 246 7.568528 18.61857888 Ylistrum balloti 509963 Mollusca Mollusca 52.8 0.022   NTclustered gi|2592069921|ref|XM_060214807.1| 509963 g9484 i0 100 0.113821138211382 28 0 11 0 139 166 13196 13169 PREDICTED: Ylistrum balloti protocadherin Fat 1-like (LOC132550716), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Ylistrum Ylistrum balloti
14939802 14939802 PRJNA937226_S_NODE_20352_length_184_cov_2.681481_g20225_i0 PRJNA937226 20352 184 2.681481 4.93392504 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.016   NTclustered gi|2913000417|dbj|AP039607.1| 145626 g20225 i0 100 0.152173913043478 28 0 15 0 73 100 8953122 8953149 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 26, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
23864195 23864195 PRJNA937226_S_NODE_18659_length_191_cov_1.316901_g18532_i0 PRJNA937226 18659 191 1.316901 2.51528091 Biomphalaria glabrata 6526 Mollusca Mollusca 60.2 9.82e-5   NTclustered gi|2502134919|ref|XM_056013775.1| 6526 g18532 i0 100 0.963350785340314 32 0 17 0 72 103 233 264 PREDICTED: Biomphalaria glabrata guanine nucleotide-binding protein-like 3 homolog (LOC106077405), transcript variant X5, mRNA blastn 184 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
31984717 31984717 PRJNA937226_S_NODE_6498_length_281_cov_42.500000_g6371_i0 PRJNA937226 6498 281 42.5 119.425 Haliotis asinina 109174 Mollusca Mollusca 43.5 0.0296   NR XP_067657806.1 109174 g6371 i0 35.4 1.36654804270463 65 36 68.3 2 238 47 144 203 XP_067657806.1 uncharacterized protein [Haliotis asinina] diamond 384 43.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;