RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA937226", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA937226 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29424814 29424814 PRJNA937226_S_NODE_2329_length_405_cov_8.146067_g2202_i0 PRJNA937226 2329 405 8.146067 32.99157135 Stylophora pistillata 50429 Cnidaria other_Eukaryota 45.4 0.0236   NR PFX23400.1 50429 g2202 i0 43.5 0.511111111111111 69 39 51.1 0 399 193 425 493 PFX23400.1 Carbonic anhydrase 2 [Stylophora pistillata] diamond 207 45.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata
30663899 30663899 PRJNA937226_S_NODE_29813_length_157_cov_4.425926_g29686_i0 PRJNA937226 29813 157 4.425926 6.94870382 root 1 Root_unresolved Root_unresolved 73.2 2.06e-13   NR PFX23400.1 50429 g29686 i0 82 1.91082802547771 50 9 95.5 0 6 155 323 372 PFX23400.1 Carbonic anhydrase 2 [Stylophora pistillata] diamond 300 73.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;