RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA937226", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA937226 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2187274 2187274 PRJNA937226_S_NODE_18002_length_193_cov_15.659722_g17875_i0 PRJNA937226 18002 193 15.659722 30.22326346 Hirudo verbana 311461 Annelida Annelida 58.4 3.58e-4   NTclustered gi|2918369714|emb|OZ237790.1| 311461 g17875 i0 100 0.305699481865285 31 0 16 0 22 52 1763905 1763935 Hirudo verbana genome assembly, chromosome: 12 blastn 59 58.4 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
22588883 22588883 PRJNA937226_S_NODE_13058_length_219_cov_25.976471_g12931_i0 PRJNA937226 13058 219 25.976471 56.88847149 Hirudo verbana 311461 Annelida Annelida 56.5 0.001   NTclustered gi|2918369720|emb|OZ237792.1| 311461 g12931 i0 92.5 0.598173515981735 40 1 18 2 145 184 3045071 3045108 Hirudo verbana genome assembly, chromosome: 14 blastn 131 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
22588920 22588920 PRJNA937226_S_NODE_22178_length_178_cov_0.682171_g22051_i0 PRJNA937226 22178 178 0.682171 1.21426438 unclassified maldanid 167827 Annelida Annelida 147 6.72e-31   NTclustered gi|17999857|gb|AY040694.1| 167827 g22051 i0 90.826 56.8876404494382 109 10 61 0 56 164 519 627 Unclassified maldanid 18S ribosomal RNA gene, partial sequence blastn 10126 147 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Maldanidae   unclassified maldanid

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;