RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA934472" and tax_phylum = "Thermoproteota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA934472 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6014250 6014250 PRJNA934472_P_NODE_27305_length_283_cov_1.214286_g26927_i0 PRJNA934472 27305 283 1.214286 3.43642938 uncultured crenarchaeote 29281 Archaea Archaea 475 1.3099999999999999e-129   NTclustered gi|42557759|emb|AJ627422.1| 29281 g26927 i0 97.153 75.4734982332156 281 8 99 0 1 281 40384 40664 Uncultured crenarchaeote genomic fragment 54d9 blastn 21359 475 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
14938868 14938868 PRJNA934472_P_NODE_2412_length_864_cov_1.977244_g2156_i0 PRJNA934472 2412 864 1.977244 17.08338816 uncultured crenarchaeote 29281 Archaea Archaea 1432 0   NTclustered gi|42557759|emb|AJ627422.1| 29281 g2156 i0 96.644 95.7233796296296 864 25 99 3 1 862 41945 42806 Uncultured crenarchaeote genomic fragment 54d9 blastn 82705 1432 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
23863108 23863108 PRJNA934472_P_NODE_14679_length_374_cov_1.601329_g14302_i0 PRJNA934472 14679 374 1.601329 5.98897046 uncultured crenarchaeote 29281 Archaea Archaea 680 0   NTclustered gi|42557759|emb|AJ627422.1| 29281 g14302 i0 99.465 86.5534759358289 374 2 100 0 1 374 41618 41245 Uncultured crenarchaeote genomic fragment 54d9 blastn 32371 680 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;