RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA934472" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA934472 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24207130 24207130 PRJNA934472_P_NODE_32459_length_261_cov_1.797872_g32081_i0 PRJNA934472 32459 261 1.797872 4.69244592 Mucor 4830 Fungi Fungi 147 1.06e-30   NTclustered gi|168378|gb|M26190.1|MRARRHA 4841 g32081 i0 84.564 45.5095785440613 149 21 57 2 1 149 2168 2022 M.racemosus (Zygomycetes) 25S ribosomal RNA gene blastn 11878 147 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
30568843 30568843 PRJNA934472_P_NODE_30933_length_267_cov_1.778351_g30555_i0 PRJNA934472 30933 267 1.778351 4.74819717 Mucorales 4827 Fungi Fungi 97.4 1.67e-21   NR CEP11274.1 35722 g30555 i0 58.5 10.9550561797753 82 34 92.1 0 2 247 350 431 CEP11274.1 hypothetical protein [Parasitella parasitica] diamond 2925 97.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Parasitella Parasitella parasitica
31896855 31896855 PRJNA934472_P_NODE_40377_length_211_cov_4.094203_g39999_i0 PRJNA934472 40377 211 4.094203 8.63876833 Eukaryota 2759 Fungi Fungi 70.5 4.2e-12   NR XP_069236604.1 4840 g39999 i0 52.4 13.3507109004739 63 30 89.6 0 208 20 1522 1584 XP_069236604.1 uncharacterized protein VTP01DRAFT_2957 [Rhizomucor pusillus] diamond 2817 70.9 0.994358251057828 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;