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contig_metadata

11 rows where bioproject = "PRJNA934472" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA934472 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2186400 2186400 PRJNA934472_P_NODE_28062_length_279_cov_2.111650_g27684_i0 PRJNA934472 28062 279 2.11165 5.8915035 Methanobacteriota archaeon 2026739 Archaea Archaea 135 2.4800000000000003e-27   NTclustered gi|2108022879|gb|CP070767.1| 2026739 g27684 i0 78.947 1.43727598566308 209 36 73 8 66 269 638725 638930 MAG: Methanobacteriota archaeon isolate bin24 chromosome blastn 401 135 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
4739025 4739025 PRJNA934472_P_NODE_11424_length_421_cov_2.551724_g11047_i0 PRJNA934472 11424 421 2.551724 10.74275804 uncultured marine group II/III euryarchaeote AD1000_03_F11 1457703 Archaea Archaea 130 1.82e-25   NTclustered gi|663499488|gb|KF900309.1| 1457703 g11047 i0 77.155 9.85748218527316 232 48 54 5 1 229 29938 29709 Uncultured marine group II/III euryarchaeote AD1000_03_F11 genomic sequence blastn 4150 130 1 Archaea   Methanobacteriati Methanobacteriota         uncultured marine group II/III euryarchaeote AD1000_03_F11
6359506 6359506 PRJNA934472_P_NODE_17305_length_347_cov_2.905109_g16928_i0 PRJNA934472 17305 347 2.905109 10.08072823 Methanocorpusculum 2192 Archaea Archaea 503 7.55e-138   NTclustered gi|470481509|ref|NR_076479.1| 83984 g16928 i0 92.795 126.968299711816 347 25 100 0 1 347 1453 1799 Methanocorpusculum labreanum strain Z 23S ribosomal RNA gene, complete sequence blastn 44058 503 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum labreanum
14009573 14009573 PRJNA934472_P_NODE_31151_length_266_cov_2.663212_g30773_i0 PRJNA934472 31151 266 2.663212 7.08414392 Archaea 2157 Archaea Archaea 189 1.78e-43   NTclustered gi|663518477|gb|KF900844.1| 1456434 g30773 i0 79.699 79.2518796992481 266 50 99 4 1 265 1394 1132 Uncultured marine group II/III euryarchaeote KM3_33_C12 genomic sequence blastn 21081 189 1 Archaea   Methanobacteriati Methanobacteriota         uncultured marine group II/III euryarchaeote KM3_33_C12
17489315 17489315 PRJNA934472_P_NODE_27674_length_281_cov_1.442308_g27296_i0 PRJNA934472 27674 281 1.442308 4.05288548 Halococcus dombrowskii 179637 Archaea Archaea 220 6.71e-53   NTclustered gi|2221489803|gb|CP095005.1| 179637 g27296 i0 80.919 1.00711743772242 283 50 100 4 1 281 235585 235305 Halococcus dombrowskii strain H4 chromosome, complete genome blastn 283 220 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus dombrowskii
20037344 20037344 PRJNA934472_P_NODE_11736_length_416_cov_2.233236_g11359_i0 PRJNA934472 11736 416 2.233236 9.29026176 uncultured euryarchaeote 114243 Archaea Archaea 747 0   NTclustered gi|62946358|gb|DQ004705.1| 114243 g11359 i0 99.755 98.2331730769231 408 0 98 1 10 416 552 145 Uncultured euryarchaeote isolate SSCP band Bo64-05-01 16S ribosomal RNA gene, partial sequence blastn 40865 747 1 Archaea   Methanobacteriati Methanobacteriota         uncultured euryarchaeote
21657755 21657755 PRJNA934472_P_NODE_16677_length_353_cov_2.257143_g16300_i0 PRJNA934472 16677 353 2.257143 7.96771479 Methanobacteriati 3366610 Archaea Archaea 652 0   NTclustered gi|224979270|gb|FJ752570.1| 198240 g16300 i0 100 93.4220963172804 353 0 100 0 1 353 30 382 Uncultured methanogenic archaeon clone E18_16S1_Mx-03 16S ribosomal RNA gene, partial sequence blastn 32978 652 1 Archaea   Methanobacteriati Methanobacteriota         uncultured methanogenic archaeon
25482170 25482170 PRJNA934472_P_NODE_40360_length_212_cov_4.402878_g39982_i0 PRJNA934472 40360 212 4.402878 9.33410136 Methanobacteriati 3366610 Archaea Archaea 392 9.67e-105   NTclustered gi|224979271|gb|FJ752571.1| 198240 g39982 i0 100 99.8066037735849 212 0 100 0 1 212 475 686 Uncultured methanogenic archaeon clone E18_16S2_Mx-03 16S ribosomal RNA gene, partial sequence blastn 21159 392 1 Archaea   Methanobacteriati Methanobacteriota         uncultured methanogenic archaeon
26771797 26771797 PRJNA934472_P_NODE_38901_length_241_cov_0.916667_g38523_i0 PRJNA934472 38901 241 0.916667 2.20916747 Halococcus hamelinensis 332168 Archaea Archaea 60.1 4.57e-10   NR WP_394295090.1 332168 g38523 i0 80 0.435684647302905 35 7 43.6 0 105 1 1 35 WP_394295090.1 homing endonuclease associated repeat-containing protein [Halococcus hamelinensis] diamond 105 60.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus hamelinensis
30309840 30309840 PRJNA934472_P_NODE_38952_length_241_cov_0.916667_g38574_i0 PRJNA934472 38952 241 0.916667 2.20916747 Halococcus hamelinensis 332168 Archaea Archaea 51.6 3.82e-6   NR WP_007695307.1 332168 g38574 i0 63.9 0.448132780082988 36 13 44.8 0 74 181 4 39 WP_007695307.1 DUF5615 family PIN-like protein [Halococcus hamelinensis] diamond 108 51.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus hamelinensis
31232464 31232464 PRJNA934472_P_NODE_38935_length_241_cov_0.916667_g38557_i0 PRJNA934472 38935 241 0.916667 2.20916747 Natronorubrum 134813 Archaea Archaea 70.9 3.12e-12   NR WP_241434309.1 63128 g38557 i0 48.7 1.89211618257261 76 39 94.6 0 228 1 241 316 WP_241434309.1 hypothetical protein [Natronorubrum tibetense] diamond 456 70.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronorubrum Natronorubrum tibetense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;