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contig_metadata

23 rows where bioproject = "PRJNA934472" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 23 ✖

tax_kingdom 1

bioproject 1

  • PRJNA934472 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3461771 3461771 PRJNA934472_P_NODE_21323_length_316_cov_1.444444_g20946_i0 PRJNA934472 21323 316 1.444444 4.56444304 Terriglobia bacterium 2081523 Bacteria Bacteria 401 2.5499999999999992e-107   NTclustered gi|2874253792|emb|OY969776.1| 2081523 g20946 i0 89.655 97.8481012658228 319 27 100 5 1 316 34133 34448 MAG: Terriglobia bacterium isolate MFD00008.bin.1.63 genome assembly, chromosome: 1 blastn 30920 401 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
3461902 3461902 PRJNA934472_P_NODE_27243_length_283_cov_1.319048_g26865_i0 PRJNA934472 27243 283 1.319048 3.73290584 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 196 1.14e-45   NTclustered gi|2874253700|emb|OY969426.1| 2651171 g26865 i0 79.298 7.58657243816254 285 55 100 4 1 283 2322150 2321868 MAG: Thermoanaerobaculia bacterium isolate MFD02979.bin.c.1 genome assembly, chromosome: 1 blastn 2147 196 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
4739546 4739546 PRJNA934472_P_NODE_35964_length_249_cov_0.875000_g35586_i0 PRJNA934472 35964 249 0.875 2.17875 Candidatus Acidiferrum sp. 3069120 Bacteria Bacteria 141 1.1199999999999999e-38   NR HMH53600.1 3069120 g35586 i0 88.7 0.855421686746988 71 8 85.5 0 1 213 266 336 HMH53600.1 hypothetical protein [Candidatus Acidiferrum sp.] diamond 213 141 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales   Candidatus Acidiferrum Candidatus Acidiferrum sp.
8564241 8564241 PRJNA934472_P_NODE_40027_length_227_cov_3.500000_g39649_i0 PRJNA934472 40027 227 3.5 7.945 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 375 1.06e-99   NTclustered gi|112980855|gb|DQ829659.1| 171953 g39649 i0 96.46 115.392070484581 226 8 99 0 2 227 927 702 Uncultured Acidobacteria bacterium clone DON16 23S ribosomal RNA gene, partial sequence blastn 26194 375 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
11114638 11114638 PRJNA934472_P_NODE_27169_length_283_cov_2.052381_g26791_i0 PRJNA934472 27169 283 2.052381 5.80823823 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 110 1.53e-19   NTclustered gi|2874253709|emb|OY969474.1| 171953 g26791 i0 75.686 28.9187279151943 255 43 86 14 1 243 3918069 3917822 MAG: uncultured Acidobacteriota bacterium isolate MFD05747.bin.1.131 genome assembly, chromosome: 1 blastn 8184 110 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
11114857 11114857 PRJNA934472_P_NODE_36769_length_246_cov_2.780347_g36391_i0 PRJNA934472 36769 246 2.780347 6.83965362 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 159 1.27e-34   NTclustered gi|2874253710|emb|OY969475.1| 2283092 g36391 i0 81.443 0.788617886178862 194 36 79 0 52 245 1816724 1816917 MAG: Pyrinomonadaceae bacterium isolate MFD01916.bin.c.1 genome assembly, chromosome: 1 blastn 194 159 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
12390285 12390285 PRJNA934472_P_NODE_32870_length_259_cov_3.446237_g32492_i0 PRJNA934472 32870 259 3.446237 8.92575383 Bacteria 2 Bacteria Bacteria 169 1.07e-46   NR MDQ3132639.1 1978231 g32492 i0 95.3 1.96911196911197 85 4 98.5 0 256 2 235 319 MDQ3132639.1 isoleucine--tRNA ligase [Acidobacteriota bacterium] diamond 510 169 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
13664701 13664701 PRJNA934472_P_NODE_32791_length_260_cov_1.192513_g32413_i0 PRJNA934472 32791 260 1.192513 3.1005338 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 436 5.600000000000001e-118   NTclustered gi|112980860|gb|DQ829664.1| 171953 g32413 i0 96.923 104.169230769231 260 8 100 0 1 260 738 997 Uncultured Acidobacteria bacterium clone DON1 23S ribosomal RNA gene, partial sequence blastn 27084 436 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
17489398 17489398 PRJNA934472_P_NODE_31754_length_264_cov_1.450262_g31376_i0 PRJNA934472 31754 264 1.450262 3.82869168 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 173 1.13e-50   NR MBA2736577.1 2283092 g31376 i0 92 16 88 7 100 0 264 1 89 176 MBA2736577.1 type IV pilus twitching motility protein PilT [Pyrinomonadaceae bacterium] diamond 4224 173 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
18762913 18762913 PRJNA934472_P_NODE_38255_length_242_cov_3.278107_g37877_i0 PRJNA934472 38255 242 3.278107 7.93301894 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 331 2.5e-86   NTclustered gi|2874253678|emb|OY969112.1| 171953 g37877 i0 91.358 677.198347107438 243 20 100 1 1 242 4733456 4733214 MAG: uncultured Acidobacteriota bacterium isolate MFD04212.bin.1.16 genome assembly, chromosome: 1 blastn 163882 331 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
20037996 20037996 PRJNA934472_P_NODE_8436_length_486_cov_2.629540_g8059_i0 PRJNA934472 8436 486 2.62954 12.7795644 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 713 0   NTclustered gi|31789464|gb|AY281356.1| 171953 g8059 i0 93.224 133.308641975309 487 29 100 4 1 486 11663 12146 Uncultured Acidobacteria bacterium clone 41b15 genomic sequence blastn 64788 713 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
23863638 23863638 PRJNA934472_P_NODE_6519_length_546_cov_3.319239_g6206_i0 PRJNA934472 6519 546 3.319239 18.12304494 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 636 1.17e-177   NTclustered gi|2621707050|emb|OY764903.1| 2212468 g6206 i0 88.598 90.3901098901099 535 45 96 11 21 545 3557732 3558260 MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 blastn 49353 636 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
26803328 26803328 PRJNA934472_P_NODE_38521_length_242_cov_0.911243_g38143_i0 PRJNA934472 38521 242 0.911243 2.20520806 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 116 1.58e-28   NR HYC62907.1 2651171 g38143 i0 70 1.97107438016529 80 24 99.2 0 1 240 74 153 HYC62907.1 DUF4097 family beta strand repeat-containing protein [Thermoanaerobaculia bacterium] diamond 477 116 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
27024958 27024958 PRJNA934472_P_NODE_30662_length_268_cov_1.989744_g30284_i0 PRJNA934472 30662 268 1.989744 5.33251392 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 97.4 2.11e-21   NR HYI13064.1 2651171 g30284 i0 93.2 2.48507462686567 44 3 49.3 0 135 266 1 44 HYI13064.1 benzoyl-CoA 2,3-epoxidase subunit BoxB [Thermoanaerobaculia bacterium] diamond 666 97.4 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
27182808 27182808 PRJNA934472_P_NODE_34762_length_252_cov_2.061453_g34384_i0 PRJNA934472 34762 252 2.061453 5.19486156 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 75.1 2.92e-15   NR HET7436009.1 2651171 g34384 i0 72.9 1.10714285714286 48 13 57.1 0 144 1 14 61 HET7436009.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 279 75.1 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
27214443 27214443 PRJNA934472_P_NODE_34382_length_254_cov_1.276243_g34004_i0 PRJNA934472 34382 254 1.276243 3.24165722 Acidobacteriota bacterium 1978231 Bacteria Bacteria 142 2.3e-40   NR MDQ3132110.1 1978231 g34004 i0 79.8 0.992125984251969 84 17 99.2 0 1 252 96 179 MDQ3132110.1 YggS family pyridoxal phosphate-dependent enzyme [Acidobacteriota bacterium] diamond 252 142 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27569056 27569056 PRJNA934472_P_NODE_33804_length_256_cov_1.420765_g33426_i0 PRJNA934472 33804 256 1.420765 3.6371584 Bacteria 2 Bacteria Bacteria 155 9.079999999999998e-42   NR MBK6725481.1 1978231 g33426 i0 86.9 3.9375 84 11 98.4 0 254 3 380 463 MBK6725481.1 formate dehydrogenase subunit alpha [Acidobacteriota bacterium] diamond 1008 155 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28983192 28983192 PRJNA934472_P_NODE_27728_length_281_cov_1.298077_g27350_i0 PRJNA934472 27728 281 1.298077 3.64759637 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 143 1.5499999999999998e-37   NR HEX8197557.1 2283092 g27350 i0 80.9 0.950177935943061 89 17 95 0 1 267 189 277 HEX8197557.1 amidohydrolase family protein [Pyrinomonadaceae bacterium] diamond 267 143 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29014829 29014829 PRJNA934472_P_NODE_27428_length_282_cov_1.770335_g27050_i0 PRJNA934472 27428 282 1.770335 4.9923447 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 100 8.709999999999999e-23   NR HXW08717.1 2910147 g27050 i0 79.3 3.45744680851064 58 12 61.7 0 2 175 334 391 HXW08717.1 pyridoxal phosphate-dependent aminotransferase [Vicinamibacterales bacterium] diamond 975 100 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
29519644 29519644 PRJNA934472_P_NODE_31310_length_266_cov_1.243523_g30932_i0 PRJNA934472 31310 266 1.243523 3.30777118 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 147 3.469999999999999e-42   NR HLL99710.1 2283092 g30932 i0 77.9 0.969924812030075 86 19 97 0 3 260 82 167 HLL99710.1 GNAT family N-acetyltransferase [Pyrinomonadaceae bacterium] diamond 258 147 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30467643 30467643 PRJNA934472_P_NODE_35493_length_250_cov_1.491525_g35115_i0 PRJNA934472 35493 250 1.491525 3.7288125 Acidobacteriota bacterium 1978231 Bacteria Bacteria 137 2.82e-35   NR MDQ3132612.1 1978231 g35115 i0 87.8 1.968 82 10 98.4 0 3 248 349 430 MDQ3132612.1 hypothetical protein [Acidobacteriota bacterium] diamond 492 137 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31700093 31700093 PRJNA934472_P_NODE_35777_length_249_cov_1.670455_g35399_i0 PRJNA934472 35777 249 1.670455 4.15943295 Vicinamibacteria bacterium 2793154 Bacteria Bacteria 155 2.91e-43   NR HSF14912.1 2793154 g35399 i0 100 0.987951807228916 82 0 98.8 0 247 2 82 163 HSF14912.1 YMGG-like glycine zipper-containing protein [Vicinamibacteria bacterium] diamond 246 155 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria       Vicinamibacteria bacterium
32774681 32774681 PRJNA934472_P_NODE_26140_length_288_cov_1.739535_g25762_i0 PRJNA934472 26140 288 1.739535 5.0098608 Acidobacteriota bacterium 1978231 Bacteria Bacteria 109 2.51e-25   NR MDQ3130306.1 1978231 g25762 i0 44.6 1.91666666666667 184 13 99 2 286 2 170 353 MDQ3130306.1 prolyl oligopeptidase family serine peptidase [Acidobacteriota bacterium] diamond 552 109 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;