contig_metadata
18 rows where bioproject = "PRJNA934472", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2186725 | 2186725 | PRJNA934472_P_NODE_8042_length_496_cov_2.730496_g7723_i0 | PRJNA934472 | 8042 | 496 | 2.730496 | 13.54326016 | Melittangium boletus | 83453 | Bacteria | Bacteria | 902 | 0 | NTclustered | gi|1243026503|gb|CP022163.1| | 1294270 | g7723 | i0 | 99.595 | 219.493951612903 | 494 | 2 | 99 | 0 | 1 | 494 | 3597705 | 3597212 | Melittangium boletus DSM 14713 chromosome, complete genome | blastn | 108869 | 902 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Melittangium | Melittangium boletus | ||
| 3807606 | 3807606 | PRJNA934472_P_NODE_36403_length_247_cov_4.327586_g36025_i0 | PRJNA934472 | 36403 | 247 | 4.327586 | 10.68913742 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 438 | 1.4699999999999995e-118 | NTclustered | gi|28395338|gb|AY190663.1| | 56 | g36025 | i0 | 100 | 365.344129554656 | 237 | 0 | 96 | 0 | 11 | 247 | 420 | 184 | Polyangium cellulosum strain So9881 clone 2 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 90240 | 438 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 7633617 | 7633617 | PRJNA934472_P_NODE_18186_length_340_cov_1.228464_g17809_i0 | PRJNA934472 | 18186 | 340 | 1.228464 | 4.1767776 | Archangium | 47 | Bacteria | Bacteria | 606 | 5.469999999999998e-169 | NTclustered | gi|2809295724|gb|CP102578.1| | 48 | g17809 | i0 | 98.824 | 276.961764705882 | 340 | 4 | 100 | 0 | 1 | 340 | 336832 | 336493 | Archangium gephyra strain SDU49 chromosome, complete genome | blastn | 94167 | 606 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 11114494 | 11114494 | PRJNA934472_P_NODE_19829_length_327_cov_0.893701_g19452_i0 | PRJNA934472 | 19829 | 327 | 0.893701 | 2.92240227 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 512 | 1.17e-140 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g19452 | i0 | 94.833 | 139.880733944954 | 329 | 15 | 100 | 1 | 1 | 327 | 3942508 | 3942180 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 45741 | 512 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 13664541 | 13664541 | PRJNA934472_P_NODE_25111_length_293_cov_1.977273_g24733_i0 | PRJNA934472 | 25111 | 293 | 1.977273 | 5.79340989 | Haliangium ochraceum | 80816 | Bacteria | Bacteria | 187 | 7.139999999999998e-43 | NTclustered | gi|262076673|gb|CP001804.1| | 502025 | g24733 | i0 | 78.84 | 36.2491467576792 | 293 | 50 | 98 | 11 | 1 | 287 | 2900952 | 2901238 | Haliangium ochraceum DSM 14365, complete genome | blastn | 10621 | 187 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Haliangium | Haliangium ochraceum | |||
| 13664855 | 13664855 | PRJNA934472_P_NODE_39151_length_238_cov_4.406061_g38773_i0 | PRJNA934472 | 39151 | 238 | 4.406061 | 10.48642518 | Chondromyces crocatus | 52 | Bacteria | Bacteria | 390 | 3.99e-104 | NTclustered | gi|169977285|emb|AM946600.1| | 52 | g38773 | i0 | 96.218 | 168.239495798319 | 238 | 9 | 100 | 0 | 1 | 238 | 1161 | 1398 | Chondromyces crocatus ajudazol biosynthesis gene cluster, strain Cmc5 | blastn | 40041 | 390 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Chondromyces | Chondromyces crocatus | |||
| 17489397 | 17489397 | PRJNA934472_P_NODE_31734_length_264_cov_1.612565_g31356_i0 | PRJNA934472 | 31734 | 264 | 1.612565 | 4.2571716 | Polyangium aurulentum | 2567896 | Bacteria | Bacteria | 387 | 5.82e-103 | NTclustered | gi|2235996827|gb|CP079217.1| | 2567896 | g31356 | i0 | 93.182 | 76.9318181818182 | 264 | 17 | 100 | 1 | 1 | 264 | 443023 | 443285 | Polyangium aurulentum strain SDU3-1 chromosome, complete genome | blastn | 20310 | 387 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangium | Polyangium aurulentum | |||
| 17489452 | 17489452 | PRJNA934472_P_NODE_3414_length_729_cov_1.975610_g3129_i0 | PRJNA934472 | 3414 | 729 | 1.97561 | 14.4021969 | Pendulispora rubella | 2741070 | Bacteria | Bacteria | 1127 | 0 | NTclustered | gi|2698045512|gb|CP089929.1| | 2741070 | g3129 | i0 | 94.543 | 181.758573388203 | 733 | 35 | 100 | 4 | 1 | 729 | 7289569 | 7288838 | Pendulispora rubella strain MSr11368 chromosome, complete genome | blastn | 132502 | 1127 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora rubella | ||
| 19106852 | 19106852 | PRJNA934472_P_NODE_1375_length_1109_cov_3.013514_g1173_i0 | PRJNA934472 | 1375 | 1109 | 3.013514 | 33.41987026 | root | 1 | Root_unresolved | Root_unresolved | 1517 | 0 | NTclustered | gi|1566495190|gb|CP012670.1| | 56 | g1173 | i0 | 91.39 | 124.312894499549 | 1115 | 84 | 100 | 12 | 1 | 1109 | 2995095 | 2993987 | Sorangium cellulosum strain So ceGT47 chromosome, complete genome | blastn | 137863 | 1522 | 0.996714848883049 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 22587738 | 22587738 | PRJNA934472_P_NODE_14178_length_380_cov_1.863192_g13801_i0 | PRJNA934472 | 14178 | 380 | 1.863192 | 7.0801296 | Melittangium boletus | 83453 | Bacteria | Bacteria | 693 | 0 | NTclustered | gi|1243026503|gb|CP022163.1| | 1294270 | g13801 | i0 | 99.735 | 258.805263157895 | 378 | 1 | 99 | 0 | 1 | 378 | 3597850 | 3598227 | Melittangium boletus DSM 14713 chromosome, complete genome | blastn | 98346 | 693 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Melittangium | Melittangium boletus | ||
| 22933337 | 22933337 | PRJNA934472_P_NODE_22018_length_311_cov_3.071429_g21640_i0 | PRJNA934472 | 22018 | 311 | 3.071429 | 9.55214419 | root | 1 | Root_unresolved | Root_unresolved | 298 | 3.38e-76 | NTclustered | gi|2698055994|gb|CP089982.1| | 2905690 | g21640 | i0 | 85.034 | 254.466237942122 | 294 | 42 | 94 | 2 | 17 | 309 | 9037910 | 9038202 | Pendulispora brunnea strain MSr12523 chromosome, complete genome | blastn | 79139 | 298 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora brunnea | ||
| 22933368 | 22933368 | PRJNA934472_P_NODE_26798_length_285_cov_1.452830_g26420_i0 | PRJNA934472 | 26798 | 285 | 1.45283 | 4.1405655 | Pendulispora | 3375062 | Bacteria | Bacteria | 409 | 1.3599999999999998e-109 | NTclustered | gi|2698035964|gb|CP089984.1| | 2741071 | g26420 | i0 | 92.632 | 160.150877192982 | 285 | 20 | 100 | 1 | 1 | 285 | 7191291 | 7191574 | Pendulispora albinea strain MSr11954 chromosome, complete genome | blastn | 45643 | 411 | 0.995133819951338 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora albinea | ||
| 22933401 | 22933401 | PRJNA934472_P_NODE_33718_length_256_cov_1.967213_g33340_i0 | PRJNA934472 | 33718 | 256 | 1.967213 | 5.03606528 | Stigmatella | 40 | Bacteria | Bacteria | 351 | 2.05e-92 | NTclustered | gi|507148216|ref|NR_103023.1| | 41 | g33340 | i0 | 91.44 | 463.34375 | 257 | 20 | 100 | 2 | 1 | 256 | 62 | 317 | Stigmatella aurantiaca strain DW4/3-1 23S ribosomal RNA gene, complete sequence | blastn | 118616 | 351 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 23863264 | 23863264 | PRJNA934472_P_NODE_23079_length_305_cov_1.431034_g22701_i0 | PRJNA934472 | 23079 | 305 | 1.431034 | 4.3646537 | uncultured Polyangiaceae bacterium | 417999 | Bacteria | Bacteria | 549 | 8.27e-152 | NTclustered | gi|545342541|gb|KF505773.1| | 417999 | g22701 | i0 | 99.023 | 101.737704918033 | 307 | 1 | 100 | 2 | 1 | 305 | 192 | 498 | Uncultured Polyangiaceae bacterium clone 5257 16S ribosomal RNA gene, partial sequence | blastn | 31030 | 549 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | uncultured Polyangiaceae bacterium | ||||
| 26866975 | 26866975 | PRJNA934472_P_NODE_37681_length_244_cov_1.543860_g37303_i0 | PRJNA934472 | 37681 | 244 | 1.54386 | 3.7670184 | Archangiaceae bacterium | 2684409 | Bacteria | Bacteria | 105 | 2.86e-24 | NR | MBM4783105.1 | 2684409 | g37303 | i0 | 80.2 | 0.995901639344262 | 81 | 16 | 99.6 | 0 | 2 | 244 | 240 | 320 | MBM4783105.1 hypothetical protein [Archangiaceae bacterium] | diamond | 243 | 105 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangiaceae bacterium | |||
| 29898721 | 29898721 | PRJNA934472_P_NODE_31011_length_267_cov_1.396907_g30633_i0 | PRJNA934472 | 31011 | 267 | 1.396907 | 3.72974169 | Polyangia bacterium | 3058050 | Bacteria | Bacteria | 96.3 | 1.0499999999999999e-23 | NR | HEX7506017.1 | 3058050 | g30633 | i0 | 92.6 | 1.84269662921348 | 54 | 4 | 60.7 | 0 | 162 | 1 | 1 | 54 | HEX7506017.1 cyclic nucleotide-binding domain-containing protein [Polyangia bacterium] | diamond | 492 | 96.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangia bacterium | ||||||
| 30436017 | 30436017 | PRJNA934472_P_NODE_39613_length_233_cov_2.075000_g39235_i0 | PRJNA934472 | 39613 | 233 | 2.075 | 4.83475 | Hyalangium sp. | 2028555 | Bacteria | Bacteria | 103 | 4.449999999999999e-24 | NR | WP_407742696.1 | 2028555 | g39235 | i0 | 58.4 | 2.93562231759657 | 77 | 32 | 99.1 | 0 | 233 | 3 | 17 | 93 | WP_407742696.1 amidohydrolase family protein [Hyalangium sp.] | diamond | 684 | 103 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Hyalangium | Hyalangium sp. | ||
| 32016386 | 32016386 | PRJNA934472_P_NODE_37018_length_246_cov_0.890173_g36640_i0 | PRJNA934472 | 37018 | 246 | 0.890173 | 2.18982558 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 84.7 | 3.67e-17 | NR | HZO15549.1 | 2268199 | g36640 | i0 | 52.1 | 0.865853658536585 | 71 | 33 | 86.6 | 1 | 240 | 28 | 262 | 331 | HZO15549.1 hypothetical protein [Polyangiaceae bacterium] | diamond | 213 | 84.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;