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contig_metadata

8 rows where bioproject = "PRJNA934472", tax_kingdom = "Pseudomonadati" and tax_phylum = "Abditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 8 ✖

tax_kingdom 1

  • Pseudomonadati · 8 ✖

bioproject 1

  • PRJNA934472 · 8 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
911304 911304 PRJNA934472_P_NODE_4881_length_619_cov_2.278388_g4572_i0 PRJNA934472 4881 619 2.278388 14.10322172 Abditibacteriota bacterium 2783868 Bacteria Bacteria 739 0   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g4572 i0 88.133 189.148626817448 632 61 100 9 1 619 2852145 2851515 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 117083 739 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
4739724 4739724 PRJNA934472_P_NODE_9624_length_457_cov_2.611979_g9247_i0 PRJNA934472 9624 457 2.611979 11.93674403 Abditibacteriota bacterium 2783868 Bacteria Bacteria 488 2.8499999999999995e-133   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g9247 i0 86.057 302.98249452954 459 58 100 6 1 457 2851717 2851263 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 138463 488 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
6014551 6014551 PRJNA934472_P_NODE_5005_length_612_cov_4.688312_g4696_i0 PRJNA934472 5005 612 4.688312 28.69246944 Abditibacteriota bacterium 2783868 Bacteria Bacteria 270 1.5399999999999998e-67   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g4696 i0 85.338 118.745098039216 266 33 85 6 348 610 2850969 2850707 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 72672 270 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
7288970 7288970 PRJNA934472_P_NODE_19126_length_332_cov_2.073359_g18749_i0 PRJNA934472 19126 332 2.073359 6.88355188 Abditibacteriota bacterium 2783868 Bacteria Bacteria 255 2.22e-63   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g18749 i0 82.886 205.114457831325 298 37 87 13 12 300 2852463 2852171 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 68098 255 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
11114444 11114444 PRJNA934472_P_NODE_17389_length_346_cov_4.589744_g17012_i0 PRJNA934472 17389 346 4.589744 15.88051424 Abditibacteriota bacterium 2783868 Bacteria Bacteria 368 2.86e-97   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g17012 i0 86.471 131.112716763006 340 40 97 6 10 346 2852809 2853145 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 45365 368 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
11114593 11114593 PRJNA934472_P_NODE_24769_length_295_cov_1.387387_g24391_i0 PRJNA934472 24769 295 1.387387 4.09279165 Abditibacteriota bacterium 2783868 Bacteria Bacteria 263 1.16e-65   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g24391 i0 82.943 61.5254237288136 299 43 100 7 1 295 2851050 2850756 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 18150 263 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
14939182 14939182 PRJNA934472_P_NODE_39332_length_236_cov_3.361963_g38954_i0 PRJNA934472 39332 236 3.361963 7.93423268 Abditibacteriota bacterium 2783868 Bacteria Bacteria 387 5.11e-103   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g38954 i0 96.581 307.474576271186 234 7 99 1 1 234 2853575 2853343 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 72564 387 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
22588228 22588228 PRJNA934472_P_NODE_39018_length_240_cov_2.730539_g38640_i0 PRJNA934472 39018 240 2.730539 6.5532936 Abditibacteriota bacterium 2783868 Bacteria Bacteria 165 2.66e-36   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g38640 i0 85.802 1.35 162 16 66 6 82 240 2851023 2851180 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 324 165 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;