RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA934472", tax_kingdom = "Orthornavirae" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA934472 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20037944 20037944 PRJNA934472_P_NODE_40556_length_199_cov_4.658730_g40178_i0 PRJNA934472 40556 199 4.65873 9.2708727 Potyvirus sp. 1955171 Viruses Viruses 224 3.4599999999999996e-54   NTclustered gi|2196272727|gb|MZ218256.1| 1955171 g40178 i0 94.483 33.1507537688442 145 8 73 0 2 146 1376 1520 MAG: Potyvirus sp. isolate 121-k141_18220 polyprotein gene, partial cds blastn 6597 224 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus sp.
22587984 22587984 PRJNA934472_P_NODE_27498_length_282_cov_1.311005_g27120_i0 PRJNA934472 27498 282 1.311005 3.6970341 Sobemovirus sp. 2809869 Viruses Viruses 353 6.37e-93   NTclustered gi|2171145024|gb|MZ218240.1| 2809869 g27120 i0 89.324 363.36524822695 281 30 99 0 1 281 4688 4408 MAG: Sobemovirus sp. isolate 267-k141_60134 genomic sequence blastn 102469 353 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Sobemovirus Sobemovirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;