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contig_metadata

20 rows where bioproject = "PRJNA934472", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 20 ✖

tax_clade 1

  • Sar · 20 ✖

bioproject 1

  • PRJNA934472 · 20 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
911167 911167 PRJNA934472_P_NODE_34241_length_254_cov_2.254144_g33863_i0 PRJNA934472 34241 254 2.254144 5.72552576 Cercomonas sp. 1979794 SAR_Eukaryotes SAR_Eukaryotes 272 1.6299999999999998e-68   NTclustered gi|2651357801|gb|PP174314.1| 1979794 g33863 i0 86.454 41.6220472440945 251 30 97 3 6 252 2722 2472 Cercomonas sp. isolate P5 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 10572 272 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp.
2186084 2186084 PRJNA934472_P_NODE_13082_length_394_cov_21.305296_g12705_i0 PRJNA934472 13082 394 21.305296 83.94286624 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 411 5.4e-110   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g12705 i0 86.684 47.7944162436548 383 35 97 9 14 394 4039 3671 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 18831 411 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
3461607 3461607 PRJNA934472_P_NODE_13043_length_395_cov_2.118012_g12666_i0 PRJNA934472 13043 395 2.118012 8.3661474 Bodomorpha sp. HFCC55 624126 SAR_Eukaryotes SAR_Eukaryotes 721 0   NTclustered gi|225216790|gb|FJ176705.1| 624126 g12666 i0 99.494 8.87848101265823 395 2 100 0 1 395 304 698 Bodomorpha sp. 28S ribosomal RNA gene, partial sequence blastn 3507 721 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC55
3461619 3461619 PRJNA934472_P_NODE_13903_length_383_cov_7.325806_g13526_i0 PRJNA934472 13903 383 7.325806 28.05783698 Cercomonas sp. 1979794 SAR_Eukaryotes SAR_Eukaryotes 106 2.77e-18   NTclustered gi|2651357781|gb|PP174297.1| 1979794 g13526 i0 82.927 24.4073107049608 123 16 32 5 63 183 3862 3981 Cercomonas sp. isolate JGP16 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9348 106 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp.
4739629 4739629 PRJNA934472_P_NODE_39884_length_229_cov_4.711538_g39506_i0 PRJNA934472 39884 229 4.711538 10.78942202 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 139 1.52e-28   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g39506 i0 96.429 22.8340611353712 84 3 37 0 2 85 3756 3839 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 5229 139 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
6014226 6014226 PRJNA934472_P_NODE_26105_length_288_cov_2.158140_g25727_i0 PRJNA934472 26105 288 2.15814 6.2154432 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 246 1.14e-60   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g25727 i0 94.904 60.5277777777778 157 8 55 0 132 288 3849 3693 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 17432 246 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
6014538 6014538 PRJNA934472_P_NODE_40505_length_202_cov_5.170543_g40127_i0 PRJNA934472 40505 202 5.170543 10.44449686 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 363 7.149999999999999e-96   NTclustered gi|238617602|gb|FJ973377.1| 188950 g40127 i0 99.01 33.2722772277228 202 2 100 0 1 202 2699 2900 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 6721 363 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
9838722 9838722 PRJNA934472_P_NODE_14228_length_379_cov_8.212418_g13851_i0 PRJNA934472 14228 379 8.212418 31.12506422 Bodomorpha sp. HFCC 92 458884 SAR_Eukaryotes SAR_Eukaryotes 695 0   NTclustered gi|197723521|gb|EF681900.2| 458884 g13851 i0 99.736 2 379 1 100 0 1 379 332 710 Bodomorpha sp. HFCC 92 28S ribosomal RNA gene, partial sequence blastn 758 695 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC 92
9839254 9839254 PRJNA934472_P_NODE_40448_length_205_cov_11.303030_g40070_i0 PRJNA934472 40448 205 11.30303 23.1712115 Gymnophrys sp. ATCC 50923 646463 SAR_Eukaryotes SAR_Eukaryotes 307 3.4600000000000006e-79   NTclustered gi|238617604|gb|FJ973379.1| 646463 g40070 i0 93.659 97.6682926829268 205 13 100 0 1 205 2022 1818 Gymnophrys sp. ATCC 50923 28S ribosomal RNA gene, partial sequence blastn 20022 307 1 Eukaryota Sar   Cercozoa       Gymnophrys Gymnophrys sp. ATCC 50923
12389875 12389875 PRJNA934472_P_NODE_11930_length_412_cov_120.233038_g11553_i0 PRJNA934472 11930 412 120.233038 495.36011656 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 702 0   NTclustered gi|238617605|gb|FJ973380.1| 45107 g11553 i0 97.349 100.597087378641 415 8 100 3 1 412 2561 2147 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 41446 702 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
12390082 12390082 PRJNA934472_P_NODE_22150_length_310_cov_11.434599_g21772_i0 PRJNA934472 22150 310 11.434599 35.4472569 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 331 3.32e-86   NTclustered gi|238617605|gb|FJ973380.1| 45107 g21772 i0 86.129 79.7129032258065 310 40 100 3 1 310 1279 1585 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 24711 331 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
13664790 13664790 PRJNA934472_P_NODE_36391_length_247_cov_83.718391_g36013_i0 PRJNA934472 36391 247 83.718391 206.78442577 uncultured Cercozoa 175275 SAR_Eukaryotes SAR_Eukaryotes 457 4.05e-124   NTclustered gi|571959503|gb|KF994989.1| 175275 g36013 i0 100 100 247 0 100 0 1 247 384 138 Uncultured cercozoan isolate DGGE gel band 1c-7 18S ribosomal RNA gene, partial sequence blastn 24700 457 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
14938956 14938956 PRJNA934472_P_NODE_28432_length_277_cov_14.254902_g28054_i0 PRJNA934472 28432 277 14.254902 39.48607854 Cercomonas sp. 1979794 SAR_Eukaryotes SAR_Eukaryotes 364 2.879999999999999e-96   NTclustered gi|2651357794|gb|PP174308.1| 1979794 g28054 i0 90.714 99.8628158844765 280 17 99 9 1 276 4059 3785 Cercomonas sp. isolate JGP5 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 27662 364 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp.
17489306 17489306 PRJNA934472_P_NODE_27354_length_282_cov_6.789474_g26976_i0 PRJNA934472 27354 282 6.789474 19.14631668 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 211 4.06e-50   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g26976 i0 81.295 32.7730496453901 278 37 98 9 6 282 4000 3737 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 9242 211 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
18762873 18762873 PRJNA934472_P_NODE_36635_length_247_cov_1.160920_g36257_i0 PRJNA934472 36635 247 1.16092 2.8674724 Lotharella vacuolata 74820 SAR_Eukaryotes SAR_Eukaryotes 89.8 1.7e-13   NTclustered gi|290760484|gb|GQ144687.1| 74820 g36257 i0 89.855 0.558704453441296 69 7 28 0 111 179 1732 1664 Lotharella vacuolata large subunit ribosomal RNA gene, partial sequence blastn 138 89.8 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Lotharella Lotharella vacuolata
20037562 20037562 PRJNA934472_P_NODE_22836_length_306_cov_5.201717_g22458_i0 PRJNA934472 22836 306 5.201717 15.91725402 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 481 3.069999999999999e-131   NTclustered gi|238617605|gb|FJ973380.1| 45107 g22458 i0 95.098 98.8954248366013 306 13 99 2 2 306 1277 1581 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 30262 481 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
22587896 22587896 PRJNA934472_P_NODE_22678_length_307_cov_4.632479_g22300_i0 PRJNA934472 22678 307 4.632479 14.22171053 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 484 2.3799999999999994e-132   NTclustered gi|238617605|gb|FJ973380.1| 45107 g22300 i0 95.41 93.3745928338762 305 13 99 1 4 307 1277 1581 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 28666 484 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
23863134 23863134 PRJNA934472_P_NODE_16119_length_358_cov_13.364912_g15742_i0 PRJNA934472 16119 358 13.364912 47.84638496 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 542 1.6499999999999999e-149   NTclustered gi|238617602|gb|FJ973377.1| 188950 g15742 i0 93.923 1.01117318435754 362 17 100 5 1 358 768 408 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 362 542 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
23863313 23863313 PRJNA934472_P_NODE_25659_length_290_cov_7.198157_g25281_i0 PRJNA934472 25659 290 7.198157 20.8746553 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 263 1.14e-65   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g25281 i0 84.043 60.7758620689655 282 36 97 8 9 290 3968 3696 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 17625 263 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
25136991 25136991 PRJNA934472_P_NODE_19200_length_331_cov_33.496124_g18823_i0 PRJNA934472 19200 331 33.496124 110.87217044 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 479 1.2099999999999996e-130   NTclustered gi|238617605|gb|FJ973380.1| 45107 g18823 i0 92.749 96.8398791540785 331 24 100 0 1 331 1271 1601 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 32054 479 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;