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contig_metadata

15 rows where bioproject = "PRJNA934472", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 15 ✖

tax_clade 1

  • Discoba · 15 ✖

bioproject 1

  • PRJNA934472 · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2531184 2531184 PRJNA934472_P_NODE_21102_length_317_cov_6.295082_g20725_i0 PRJNA934472 21102 317 6.295082 19.95540994 Naegleria 5761 Heterolobosea other_Eukaryota 470 6.92e-128   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g20725 i0 93.375 12 317 21 100 0 1 317 4336 4020 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 3804 470 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
3807482 3807482 PRJNA934472_P_NODE_11303_length_423_cov_7.220000_g10926_i0 PRJNA934472 11303 423 7.22 30.5406 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 782 0   NTclustered gi|399764157|gb|JQ271668.1| 1217110 g10926 i0 100 25.2269503546099 423 0 100 0 1 423 479 57 Allovahlkampfia sp. PKD 2011a strain 4165 18S ribosomal RNA gene, partial sequence blastn 10671 782 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
4739414 4739414 PRJNA934472_P_NODE_30144_length_270_cov_20.431472_g29766_i0 PRJNA934472 30144 270 20.431472 55.1649744 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 418 2.1199999999999993e-112   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g29766 i0 99.138 22.1851851851852 232 2 100 0 1 232 2399 2630 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 5990 418 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
6014340 6014340 PRJNA934472_P_NODE_3105_length_759_cov_11.555394_g2827_i0 PRJNA934472 3105 759 11.555394 87.70544046 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 1363 0   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g2827 i0 99.078 26.6455862977602 759 7 100 0 1 759 4560 3802 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 20224 1363 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
7289251 7289251 PRJNA934472_P_NODE_33686_length_256_cov_2.426230_g33308_i0 PRJNA934472 33686 256 2.42623 6.2111488 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 368 2.03e-97   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g33308 i0 92.578 3.0078125 256 19 100 0 1 256 4286 4031 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 770 368 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
8563719 8563719 PRJNA934472_P_NODE_15047_length_369_cov_10.722973_g14670_i0 PRJNA934472 15047 369 10.722973 39.56777037 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 616 9.909999999999999e-172   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g14670 i0 96.757 5.05149051490515 370 11 100 1 1 369 3984 3615 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1864 616 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
9838974 9838974 PRJNA934472_P_NODE_27008_length_284_cov_1.483412_g26630_i0 PRJNA934472 27008 284 1.483412 4.21289008 Naegleria sp. RAW-W4/PAK/6b 1392879 Heterolobosea other_Eukaryota 514 2.78e-141   NTclustered gi|544310534|gb|KF442972.1| 1392879 g26630 i0 99.296 54.6478873239437 284 2 100 0 1 284 28 311 Naegleria sp. RAW-W4/PAK/6b 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 15520 514 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria sp. RAW-W4/PAK/6b
11459379 11459379 PRJNA934472_P_NODE_40449_length_205_cov_9.901515_g40071_i0 PRJNA934472 40449 205 9.901515 20.29810575 Naegleria 5761 Heterolobosea other_Eukaryota 379 7.229999999999999e-101   NTclustered gi|2618963742|gb|OR769034.1| 5762 g40071 i0 100 10.1853658536585 205 0 100 0 1 205 5515 5719 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2088 379 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
12390327 12390327 PRJNA934472_P_NODE_34970_length_251_cov_19.803371_g34592_i0 PRJNA934472 34970 251 19.803371 49.70646121 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 464 2.47e-126   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g34592 i0 100 11.9641434262948 251 0 100 0 1 251 2749 2999 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 3003 464 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
13664428 13664428 PRJNA934472_P_NODE_19211_length_331_cov_6.224806_g18834_i0 PRJNA934472 19211 331 6.224806 20.60410786 Naegleria sp. BCZ4/I 395905 Heterolobosea other_Eukaryota 562 1.16e-155   NTclustered gi|110766908|gb|DQ768716.1| 395905 g18834 i0 97.281 99.8670694864048 331 9 100 0 1 331 2023 2353 Naegleria sp. BCZ4/I small subunit ribosomal RNA gene, partial sequence blastn 33056 562 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria sp. BCZ4/I
14938818 14938818 PRJNA934472_P_NODE_22152_length_310_cov_8.371308_g21774_i0 PRJNA934472 22152 310 8.371308 25.9510548 Naegleria jamiesoni 36335 Heterolobosea other_Eukaryota 573 4.999999999999998e-159   NTclustered gi|2351573|gb|U80061.1|NJU80061 36335 g21774 i0 100 97.4516129032258 310 0 100 0 1 310 703 1012 Naegleria jamiesoni 18S ribosomal RNA gene, partial sequence blastn 30210 573 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria jamiesoni
18762782 18762782 PRJNA934472_P_NODE_32655_length_260_cov_2.213904_g32277_i0 PRJNA934472 32655 260 2.213904 5.7561504 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 326 1.26e-84   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g32277 i0 89.231 3.79615384615385 260 28 100 0 1 260 2289 2548 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 987 326 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
19106900 19106900 PRJNA934472_P_NODE_22015_length_311_cov_3.495798_g21637_i0 PRJNA934472 22015 311 3.495798 10.87193178 Naegleria 5761 Heterolobosea other_Eukaryota 575 1.3899999999999995e-159   NTclustered gi|2618963742|gb|OR769034.1| 5762 g21637 i0 100 94.967845659164 311 0 100 0 1 311 65 375 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 29535 575 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
23863282 23863282 PRJNA934472_P_NODE_23979_length_299_cov_10.376106_g23601_i0 PRJNA934472 23979 299 10.376106 31.02455694 Paravahlkampfia ustiana 166958 Heterolobosea other_Eukaryota 553 6.25e-153   NTclustered gi|1121487417|gb|KX068999.1| 166958 g23601 i0 100 11.3177257525084 299 0 100 0 1 299 615 913 Paravahlkampfia ustiana strain ST-39 18S ribosomal RNA gene, partial sequence blastn 3384 553 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia ustiana
30126581 30126581 PRJNA934472_P_NODE_34372_length_254_cov_1.309392_g33994_i0 PRJNA934472 34372 254 1.309392 3.32585568 Naegleria 5761 Heterolobosea other_Eukaryota 80.9 1.61e-15   NR XP_044564645.1 5763 g33994 i0 50.6 3.82677165354331 83 40 98 1 253 5 517 598 XP_044564645.1 uncharacterized protein FDP41_001085 [Naegleria fowleri] diamond 972 81.3 0.995079950799508 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;