RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA934472", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA934472 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13664767 13664767 PRJNA934472_P_NODE_35531_length_250_cov_1.305085_g35153_i0 PRJNA934472 35531 250 1.305085 3.2627125 uncultured Candidatus Binatia bacterium 3036252 Bacteria Bacteria 289 1.59e-73   NTclustered gi|2546137839|emb|OY282432.1| 3036252 g35153 i0 87.698 51.124 252 25 99 3 1 248 2262761 2262512 MAG: uncultured Candidatus Binatia bacterium isolate 81991fb1-66cf-4eb3-b653-309a223604dd genome assembly, chromosome: 1 blastn 12781 289 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       uncultured Candidatus Binatia bacterium
29645573 29645573 PRJNA934472_P_NODE_36310_length_248_cov_0.880000_g35932_i0 PRJNA934472 36310 248 0.88 2.1824 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 42.7 0.0384   NR HLH76150.1 2785449 g35932 i0 35.1 0.895161290322581 74 34 89.5 4 3 224 245 304 HLH76150.1 MFS transporter [Candidatus Binataceae bacterium] diamond 222 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
31162133 31162133 PRJNA934472_P_NODE_36375_length_248_cov_0.880000_g35997_i0 PRJNA934472 36375 248 0.88 2.1824 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 93.6 5.14e-20   NR MFQ5853582.1 2838779 g35997 i0 58.1 0.895161290322581 74 31 89.5 0 246 25 482 555 MFQ5853582.1 amino acid adenylation domain-containing protein [Candidatus Binatia bacterium] diamond 222 93.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;