RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA934472", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 6 ✖

tax_clade 1

  • Amoebozoa · 6 ✖

bioproject 1

  • PRJNA934472 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9839283 9839283 PRJNA934472_P_NODE_5988_length_566_cov_13.900609_g5676_i0 PRJNA934472 5988 566 13.900609 78.67744694 Tychosporium acutostipes 668358 Evosea other_Eukaryota 990 0   NTclustered gi|256550195|gb|FJ792703.1| 668358 g5676 i0 98.233 68.2332155477032 566 10 100 0 1 566 1800 1235 Tychosporium acutostipes strain KE11AL small subunit ribosomal RNA gene, partial sequence blastn 38620 990 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida   Tychosporium Tychosporium acutostipes
12389887 12389887 PRJNA934472_P_NODE_12550_length_402_cov_30.337386_g12173_i0 PRJNA934472 12550 402 30.337386 121.95629172 Tychosporium acutostipes 668358 Evosea other_Eukaryota 636 8.359999999999997e-178   NTclustered gi|256550195|gb|FJ792703.1| 668358 g12173 i0 95.262 38.5970149253731 401 19 99 0 2 402 409 9 Tychosporium acutostipes strain KE11AL small subunit ribosomal RNA gene, partial sequence blastn 15516 636 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida   Tychosporium Tychosporium acutostipes
16214330 16214330 PRJNA934472_P_NODE_7133_length_524_cov_2.263858_g6817_i0 PRJNA934472 7133 524 2.263858 11.86261592 Heterostelium pallidum 13642 Evosea other_Eukaryota 110 3.01e-19   NTclustered gi|60117108|ref|NC_006862.1| 13642 g6817 i0 77.57 0.824427480916031 214 27 40 16 3 211 1692 1495 Polysphondylium pallidum mitochondrion, complete genome blastn 432 110 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium pallidum
21657729 21657729 PRJNA934472_P_NODE_12657_length_401_cov_1.646341_g12280_i0 PRJNA934472 12657 401 1.646341 6.60182741 Didymium 5792 Evosea other_Eukaryota 379 1.55e-100   NTclustered gi|2161226356|gb|MZ313554.1| 289992 g12280 i0 84.236 12.0473815461347 406 47 100 15 1 401 6951 7344 Mucilago crustacea 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 4831 381 0.994750656167979 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium spongiosum
27126369 27126369 PRJNA934472_P_NODE_39362_length_236_cov_2.417178_g38984_i0 PRJNA934472 39362 236 2.417178 5.70454008 Dictyosteliaceae 2058185 Evosea other_Eukaryota 57.8 1.62e-7   NR KAF2076726.1 133409 g38984 i0 44.6 2.47881355932203 65 36 82.6 0 26 220 291 355 KAF2076726.1 hypothetical protein CYY_001983 [Polysphondylium violaceum] diamond 585 57.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
32301573 32301573 PRJNA934472_P_NODE_31539_length_265_cov_1.296875_g31161_i0 PRJNA934472 31539 265 1.296875 3.43671875 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 82.4 4.58e-16   NR PRP76242.1 1890364 g31161 i0 56.9 0.815094339622642 72 28 81.5 1 50 265 27 95 PRP76242.1 putative aminotransferase [Planoprotostelium fungivorum] diamond 216 82.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;