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contig_metadata

29 rows where bioproject = "PRJNA934332" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 29 ✖

bioproject 1

  • PRJNA934332 · 29 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
910634 910634 PRJNA934332_P_NODE_5281_length_290_cov_0.921659_g5194_i0 PRJNA934332 5281 290 0.921659 2.6728111 Gammaretrovirus gibleu 3428953 Viruses Viruses 536 6.079999999999999e-148   NTclustered gi|971888245|gb|KT724047.1| 11840 g5194 i0 100 79.3172413793103 290 0 100 0 1 290 2384 2673 Gibbon ape leukemia virus strain San Francisco, complete genome blastn 23002 536 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus gibleu
2185912 2185912 PRJNA934332_P_NODE_10002_length_244_cov_1.742690_g9915_i0 PRJNA934332 10002 244 1.74269 4.2521636 Stubburvirus LKA1 1985731 Viruses Viruses 300 7.12e-77   NTclustered gi|158345134|ref|NC_009936.1| 386793 g9915 i0 88.889 1.99180327868852 243 27 99 0 1 243 26418 26660 Pseudomonas phage LKA1, complete genome blastn 486 300 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Autographivirales Autoscriptoviridae Stubburvirus Stubburvirus LKA1
6013860 6013860 PRJNA934332_P_NODE_545_length_800_cov_2.371389_g473_i0 PRJNA934332 545 800 2.371389 18.971112 Edafosvirus sp. 2487765 Viruses Viruses 338 7.55e-111   NR AYV78014.1 2487765 g473 i0 61 3.01125 267 100 99.4 2 3 797 140 404 AYV78014.1 MAG: elongation factor 1 alpha long form [Edafosvirus sp.] diamond 2409 338 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Edafosvirus sp.
6013910 6013910 PRJNA934332_P_NODE_9645_length_245_cov_1.470930_g9558_i0 PRJNA934332 9645 245 1.47093 3.6037785 Chrocagosk virus 3129397 Viruses Viruses 246 9.449999999999999e-61   NTclustered gi|2717317479|gb|PP171845.1| 3129397 g9558 i0 91.62 25.9959183673469 179 14 73 1 67 245 1 178 MAG: Chrocagosk virus isolate CC1A_k141_83719 genomic sequence blastn 6369 246 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocagosk virus
7288749 7288749 PRJNA934332_P_NODE_526_length_813_cov_1.825676_g455_i0 PRJNA934332 526 813 1.825676 14.84274588 Gammaretrovirus gibleu 3428953 Viruses Viruses 1496 0   NTclustered gi|971888245|gb|KT724047.1| 11840 g455 i0 99.877 39.559655596556 813 1 100 0 1 813 5924 6736 Gibbon ape leukemia virus strain San Francisco, complete genome blastn 32162 1496 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus gibleu
7288774 7288774 PRJNA934332_P_NODE_8106_length_250_cov_0.870056_g8019_i0 PRJNA934332 8106 250 0.870056 2.17514 Caudoviricetes sp. 2832643 Viruses Viruses 440 4.1399999999999976e-119   NTclustered gi|2914790589|gb|OR222734.1| 2832643 g8019 i0 98.4 72.744 250 4 100 0 1 250 29367 29616 MAG: Caudoviricetes sp. isolate MSP0634 genomic sequence blastn 18186 440 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
9838587 9838587 PRJNA934332_P_NODE_3128_length_360_cov_1.428571_g3041_i0 PRJNA934332 3128 360 1.428571 5.1428556 Gammaretrovirus gibleu 3428953 Viruses Viruses 665 0   NTclustered gi|971888245|gb|KT724047.1| 11840 g3041 i0 100 20.9361111111111 360 0 100 0 1 360 8035 7676 Gibbon ape leukemia virus strain San Francisco, complete genome blastn 7537 665 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus gibleu
9838611 9838611 PRJNA934332_P_NODE_6808_length_263_cov_1.478947_g6721_i0 PRJNA934332 6808 263 1.478947 3.88963061 Caudoviricetes sp. 2832643 Viruses Viruses 244 3.69e-60   NTclustered gi|2053102184|tpg|BK020520.1| 2832643 g6721 i0 92.486 0.65779467680608406 173 9 65 3 1 171 59383 59213 MAG TPA_asm: Caudoviricetes sp. isolate ctdiI2, partial genome blastn 173 244 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
11114223 11114223 PRJNA934332_P_NODE_109_length_1589_cov_1.317942_g88_i0 PRJNA934332 109 1589 1.317942 20.94209838 Gammaretrovirus gibleu 3428953 Viruses Viruses 2913 0   NTclustered gi|971888245|gb|KT724047.1| 11840 g88 i0 99.748 61.803650094399 1589 4 100 0 1 1589 3513 5101 Gibbon ape leukemia virus strain San Francisco, complete genome blastn 98206 2913 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus gibleu
12389753 12389753 PRJNA934332_P_NODE_2490_length_395_cov_1.149068_g2403_i0 PRJNA934332 2490 395 1.149068 4.5388186 Gammaretrovirus gibleu 3428953 Viruses Viruses 725 0   NTclustered gi|971888245|gb|KT724047.1| 11840 g2403 i0 99.747 15.4430379746835 395 1 100 0 1 395 1464 1070 Gibbon ape leukemia virus strain San Francisco, complete genome blastn 6100 725 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus gibleu
12734843 12734843 PRJNA934332_P_NODE_2530_length_392_cov_0.940439_g2443_i0 PRJNA934332 2530 392 0.940439 3.6865208799999998 Betaretrovirus 140052 Viruses Viruses 719 0   NTclustered gi|9627014|ref|NC_001514.1| 11856 g2443 i0 99.745 4 392 1 100 0 1 392 7036 7427 Squirrel monkey retrovirus - HLB, complete genome blastn 1568 719 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Betaretrovirus Betaretrovirus squmon
14938511 14938511 PRJNA934332_P_NODE_2892_length_372_cov_1.484950_g2805_i0 PRJNA934332 2892 372 1.48495 5.524014 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 514 3.75e-141   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g2805 i0 91.398 1 372 32 100 0 1 372 6609 6980 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 372 514 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
16213669 16213669 PRJNA934332_P_NODE_773_length_681_cov_1.592105_g693_i0 PRJNA934332 773 681 1.592105 10.84223505 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 396 2.719999999999999e-105   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g693 i0 94.862 0.691629955947137 253 13 69 0 1 253 4452 4704 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 471 396 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
17488856 17488856 PRJNA934332_P_NODE_10574_length_243_cov_0.905882_g10487_i0 PRJNA934332 10574 243 0.905882 2.20129326 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 399 6.789999999999999e-107   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g10487 i0 96.296 1 243 9 100 0 1 243 3789 4031 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 243 399 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
17488857 17488857 PRJNA934332_P_NODE_10614_length_243_cov_0.905882_g10527_i0 PRJNA934332 10614 243 0.905882 2.20129326 Caudoviricetes sp. 2832643 Viruses Viruses 113 9.91e-21   NTclustered gi|2914991802|gb|OR222194.1| 2832643 g10527 i0 92.5 0.329218106995885 80 5 33 1 50 129 34476 34554 MAG: Caudoviricetes sp. isolate MSP0777 genomic sequence blastn 80 113 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
17488899 17488899 PRJNA934332_P_NODE_514_length_821_cov_2.500000_g443_i0 PRJNA934332 514 821 2.5 20.525 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 1109 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g443 i0 91.379 0.989037758830694 812 66 99 4 1 810 6138 5329 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 812 1109 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
17488901 17488901 PRJNA934332_P_NODE_5434_length_287_cov_1.149533_g5347_i0 PRJNA934332 5434 287 1.149533 3.29915971 Caudoviricetes sp. 2832643 Viruses Viruses 520 6.049999999999999e-143   NTclustered gi|2059983720|tpg|BK026054.1| 2832643 g5347 i0 99.303 1 287 2 100 0 1 287 14037 13751 MAG TPA_asm: Caudoviricetes sp. isolate ctZfE6, partial genome blastn 287 520 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
17488945 17488945 PRJNA934332_P_NODE_9494_length_246_cov_0.890173_g9407_i0 PRJNA934332 9494 246 0.890173 2.18982558 Florenciella sp. virus SA2 3240092 Viruses Viruses 102 5.04e-24   NR XDO01906.1 3240092 g9407 i0 58 2.96341463414634 81 30 98.8 2 3 245 215 291 XDO01906.1 hypothetical protein FloV-SA2_00084 [Florenciella sp. virus SA2] diamond 729 102 1 Viruses               Florenciella sp. virus SA2
18762291 18762291 PRJNA934332_P_NODE_4495_length_311_cov_1.252101_g4408_i0 PRJNA934332 4495 311 1.252101 3.89403411 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 377 4.22e-100   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g4408 i0 92.135 0.858520900321543 267 21 86 0 44 310 1442 1708 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 267 377 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
20037298 20037298 PRJNA934332_P_NODE_896_length_636_cov_1.275311_g814_i0 PRJNA934332 896 636 1.275311 8.11097796 Gammaretrovirus gibleu 3428953 Viruses Viruses 1170 0   NTclustered gi|971888245|gb|KT724047.1| 11840 g814 i0 99.843 20.4245283018868 636 1 100 0 1 636 7417 6782 Gibbon ape leukemia virus strain San Francisco, complete genome blastn 12990 1170 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus gibleu
21312676 21312676 PRJNA934332_P_NODE_3457_length_346_cov_1.128205_g3370_i0 PRJNA934332 3457 346 1.128205 3.9035893 Gammaretrovirus gibleu 3428953 Viruses Viruses 640 5.4999999999999996e-179   NTclustered gi|971888245|gb|KT724047.1| 11840 g3370 i0 100 30.4190751445087 346 0 100 0 1 346 3150 3495 Gibbon ape leukemia virus strain San Francisco, complete genome blastn 10525 640 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus gibleu
23862939 23862939 PRJNA934332_P_NODE_1439_length_505_cov_2.317130_g1354_i0 PRJNA934332 1439 505 2.31713 11.7015065 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 442 2.509999999999999e-119   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g1354 i0 93.581 0.586138613861386 296 19 59 0 1 296 2248 2543 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 296 442 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
25136757 25136757 PRJNA934332_P_NODE_1900_length_442_cov_1.460705_g1813_i0 PRJNA934332 1900 442 1.460705 6.4563161 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 353 1.05e-92   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g1813 i0 91.154 0.588235294117647 260 23 59 0 180 439 4195 4454 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 260 353 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
26898507 26898507 PRJNA934332_P_NODE_8041_length_250_cov_0.870056_g7954_i0 PRJNA934332 8041 250 0.870056 2.17514 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 157 2.76e-42   NR WKU61618.1 3063761 g7954 i0 98.7 0.912 76 1 91.2 0 248 21 171 246 WKU61618.1 polyprotein [Zebrafish picornavirus 2] diamond 228 157 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
27309645 27309645 PRJNA934332_P_NODE_7443_length_251_cov_1.730337_g7356_i0 PRJNA934332 7443 251 1.730337 4.34314587 Caudoviricetes sp. 2832643 Viruses Viruses 95.1 1.46e-20   NR XOR38078.1 2832643 g7356 i0 94.1 0.609561752988048 51 3 61 0 251 99 521 571 XOR38078.1 MAG: putative tail protein [Caudoviricetes sp.] diamond 153 95.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
28383000 28383000 PRJNA934332_P_NODE_9926_length_245_cov_0.895349_g9839_i0 PRJNA934332 9926 245 0.895349 2.19360505 Adintovirus bos4377 3115894 Viruses Viruses 62.8 6.64e-10   NR DBA50495.1 3115894 g9839 i0 47.3 1.8 74 39 90.6 0 222 1 2 75 DBA50495.1 MAG TPA_asm: Adenain [Adintovirus bos4377] diamond 441 62.8 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus bos4377
30025154 30025154 PRJNA934332_P_NODE_8911_length_247_cov_1.327586_g8824_i0 PRJNA934332 8911 247 1.327586 3.27913742 Fadolivirus algeromassiliense 3060017 Viruses Viruses 87 7.22e-18   NR YP_010803269.1 3060017 g8824 i0 46.9 0.983805668016194 81 43 98.4 0 1 243 288 368 YP_010803269.1 ornithine decaroboxylase [Fadolivirus algeromassiliense] diamond 243 87 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
30506019 30506019 PRJNA934332_P_NODE_10913_length_242_cov_0.911243_g10826_i0 PRJNA934332 10913 242 0.911243 2.20520806 Viruses 10239 Viruses Viruses 121 6.54e-30   NR DAD80240.1 2826775 g10826 i0 71.8 2.91322314049587 78 22 96.7 0 1 234 991 1068 DAD80240.1 MAG TPA: putative internal virion protein [Caudovirales sp. ctTqA28] diamond 705 121 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudovirales sp. ctTqA28
31288773 31288773 PRJNA934332_P_NODE_5535_length_285_cov_1.452830_g5448_i0 PRJNA934332 5535 285 1.45283 4.1405655 Erwinia phage Hena1 2678601 Viruses Viruses 120 1.48e-33   NR YP_009854391.1 2678601 g5448 i0 85.3 0.715789473684211 68 9 70.5 1 281 81 1 68 YP_009854391.1 hypothetical protein HWC84_gp184 [Erwinia phage Hena1] diamond 204 120 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Henunavirus Henunavirus hena1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;