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contig_metadata

9 rows where bioproject = "PRJNA934332" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 9 ✖

bioproject 1

  • PRJNA934332 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4738928 4738928 PRJNA934332_P_NODE_2244_length_413_cov_1.823529_g2157_i0 PRJNA934332 2244 413 1.823529 7.53117477 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 202 5.5300000000000005e-58   NR WP_295614768.1 253161 g2157 i0 69.9 0.987893462469734 136 41 98.8 0 411 4 677 812 WP_295614768.1 GTP-binding protein [uncultured Methanobrevibacter sp.] diamond 408 202 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
8563574 8563574 PRJNA934332_P_NODE_3587_length_341_cov_1.473881_g3500_i0 PRJNA934332 3587 341 1.473881 5.02593421 Methanobrevibacter sp. 66852 Archaea Archaea 209 6.3e-61   NR WP_405277409.1 66852 g3500 i0 88.5 0.994134897360704 113 13 99.4 0 2 340 550 662 WP_405277409.1 AAA family ATPase [Methanobrevibacter sp.] diamond 339 209 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
9838603 9838603 PRJNA934332_P_NODE_508_length_829_cov_2.976190_g438_i0 PRJNA934332 508 829 2.97619 24.6726151 Methanobacteriaceae 2159 Archaea Archaea 233 9.6e-72   NR MEE3444316.1 66852 g438 i0 44.2 3.00723763570567 276 133 93.7 7 783 7 10 281 MEE3444316.1 C1 family peptidase [Methanobrevibacter sp.] diamond 2493 233 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
20381756 20381756 PRJNA934332_P_NODE_8516_length_248_cov_1.548571_g8429_i0 PRJNA934332 8516 248 1.548571 3.84045608 Thermococcus 2263 Archaea Archaea 459 1.13e-124   NTclustered gi|189908859|gb|EU571472.1| 342948 g8429 i0 100 4.95564516129032 248 0 100 0 1 248 534 287 Thermococcus onnurineus dITPase gene, complete cds blastn 1229 459 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus onnurineus
27341204 27341204 PRJNA934332_P_NODE_7963_length_250_cov_0.870056_g7876_i0 PRJNA934332 7963 250 0.870056 2.17514 Methanobrevibacter sp. 66852 Archaea Archaea 111 3.1200000000000003e-26   NR WP_405277409.1 66852 g7876 i0 65.9 0.984 82 28 98.4 0 248 3 71 152 WP_405277409.1 AAA family ATPase [Methanobrevibacter sp.] diamond 246 111 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
27972566 27972566 PRJNA934332_P_NODE_5765_length_281_cov_1.451923_g5678_i0 PRJNA934332 5765 281 1.451923 4.07990363 Methanobacteriota archaeon 2026739 Archaea Archaea 64.3 1.11e-9   NR RYE95310.1 2026739 g5678 i0 80 0.373665480427046 35 7 37.4 0 281 177 271 305 RYE95310.1 MAG: hypothetical protein EOO41_05770, partial [Methanobacteriota archaeon] diamond 105 64.3 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28611117 28611117 PRJNA934332_P_NODE_4687_length_305_cov_1.767241_g4600_i0 PRJNA934332 4687 305 1.767241 5.39008505 root 1 Root_unresolved Root_unresolved 160 3.919999999999999e-43   NR WP_295614768.1 253161 g4600 i0 73.3 3.97377049180328 101 27 99.3 0 3 305 345 445 WP_295614768.1 GTP-binding protein [uncultured Methanobrevibacter sp.] diamond 1212 161 0.993788819875776 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
29456211 29456211 PRJNA934332_P_NODE_7830_length_250_cov_1.305085_g7743_i0 PRJNA934332 7830 250 1.305085 3.2627125 Methanosarcinales archaeon 2250255 Archaea Archaea 53.1 7.92e-6   NR MDR0768179.1 2250255 g7743 i0 42.3 1.8 71 37 85.2 1 3 215 96 162 MDR0768179.1 hypothetical protein [Methanosarcinales archaeon] diamond 450 53.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
31169218 31169218 PRJNA934332_P_NODE_5735_length_282_cov_1.153110_g5648_i0 PRJNA934332 5735 282 1.15311 3.2517702 root 1 Root_unresolved Root_unresolved 49.3 3.03e-4   NR MFA5772809.1 1906666 g5648 i0 36.9 1.43617021276596 65 39 68.1 2 63 254 210 273 MFA5772809.1 kelch repeat-containing protein [Thermoplasmata archaeon] diamond 405 49.3 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;