RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA934332", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJNA934332 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3461546 3461546 PRJNA934332_P_NODE_8843_length_248_cov_0.880000_g8756_i0 PRJNA934332 8843 248 0.88 2.1824 root 1 Root_unresolved Root_unresolved 101 2.3e-23   NR HLJ68423.1 2026724 g8756 i0 53.7 13.741935483871 82 38 99.2 0 248 3 151 232 HLJ68423.1 cystathionine gamma-synthase [Chloroflexota bacterium] diamond 3408 102 0.990196078431373 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
13664221 13664221 PRJNA934332_P_NODE_631_length_747_cov_1.464392_g553_i0 PRJNA934332 631 747 1.464392 10.93900824 Anaerolineales bacterium 2073117 Bacteria Bacteria 283 1.24e-90   NR MEJ5223452.1 2073117 g553 i0 57.7 11.6144578313253 241 70 96.8 1 723 1 4 212 MEJ5223452.1 saccharopine dehydrogenase C-terminal domain-containing protein [Anaerolineales bacterium] diamond 8676 283 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
30498951 30498951 PRJNA934332_P_NODE_4893_length_300_cov_1.092511_g4806_i0 PRJNA934332 4893 300 1.092511 3.277533 Chloroflexota bacterium 2026724 Bacteria Bacteria 50.4 1.8e-5   NR NOH03518.1 2026724 g4806 i0 45.5 0.66 66 33 64 2 196 5 11 75 NOH03518.1 hypothetical protein [Chloroflexota bacterium] diamond 198 50.4 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31889798 31889798 PRJNA934332_P_NODE_7357_length_253_cov_1.272222_g7270_i0 PRJNA934332 7357 253 1.272222 3.21872166 Chloroflexota bacterium 2026724 Bacteria Bacteria 44.7 0.00818   NR HLI25738.1 2026724 g7270 i0 51.4 1.18577075098814 37 18 43.9 0 2 112 250 286 HLI25738.1 VIT1/CCC1 transporter family protein [Chloroflexota bacterium] diamond 300 44.7 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;