contig_metadata
19 rows where bioproject = "PRJNA934332", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2531084 | 2531084 | PRJNA934332_P_NODE_10542_length_243_cov_0.905882_g10455_i0 | PRJNA934332 | 10542 | 243 | 0.905882 | 2.20129326 | Gemmata | 113 | Bacteria | Bacteria | 394 | 3.16e-105 | NTclustered | gi|1727537522|gb|CP042911.1| | 114 | g10455 | i0 | 95.885 | 41.59670781893 | 243 | 10 | 100 | 0 | 1 | 243 | 2944283 | 2944525 | Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome | blastn | 10108 | 394 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 3461499 | 3461499 | PRJNA934332_P_NODE_4723_length_304_cov_1.463203_g4636_i0 | PRJNA934332 | 4723 | 304 | 1.463203 | 4.44813712 | Gemmata sp. SH-PL17 | 1630693 | Bacteria | Bacteria | 431 | 3.109999999999999e-116 | NTclustered | gi|1015440974|gb|CP011271.1| | 1630693 | g4636 | i0 | 92.384 | 122.190789473684 | 302 | 23 | 99 | 0 | 3 | 304 | 558511 | 558812 | Gemmata sp. SH-PL17, complete genome | blastn | 37146 | 431 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata sp. SH-PL17 | |
| 8563613 | 8563613 | PRJNA934332_P_NODE_7727_length_251_cov_0.865169_g7640_i0 | PRJNA934332 | 7727 | 251 | 0.865169 | 2.17157419 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 248 | 2.7e-61 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g7640 | i0 | 85.654 | 7.27091633466135 | 237 | 32 | 94 | 2 | 3 | 238 | 1360755 | 1360990 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 1825 | 248 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 11114217 | 11114217 | PRJNA934332_P_NODE_10589_length_243_cov_0.905882_g10502_i0 | PRJNA934332 | 10589 | 243 | 0.905882 | 2.20129326 | Planctellipticum variicoloris | 3064265 | Bacteria | Bacteria | 255 | 1.5600000000000001e-63 | NTclustered | gi|2557458921|gb|CP130886.1| | 3064265 | g10502 | i0 | 86.192 | 9.39506172839506 | 239 | 29 | 98 | 4 | 1 | 237 | 6622908 | 6623144 | Planctellipticum variicoloris strain SH412 chromosome, complete genome | blastn | 2283 | 255 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctellipticum | Planctellipticum variicoloris | |
| 11459181 | 11459181 | PRJNA934332_P_NODE_1589_length_481_cov_1.129902_g1502_i0 | PRJNA934332 | 1589 | 481 | 1.129902 | 5.43482862 | Planctomycetia | 203683 | Bacteria | Bacteria | 758 | 0 | NTclustered | gi|10436091|gb|AF239696.1|AF239696 | 121118 | g1502 | i0 | 95.031 | 119.656964656965 | 483 | 22 | 100 | 2 | 1 | 481 | 761 | 279 | Gemmata-like str. JW11-2f5 16S ribosomal RNA gene, partial sequence | blastn | 57555 | 758 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Gemmata-like str. JW11-2f5 | ||
| 15283345 | 15283345 | PRJNA934332_P_NODE_6272_length_272_cov_2.226131_g6185_i0 | PRJNA934332 | 6272 | 272 | 2.226131 | 6.05507632 | Planctomycetia | 203683 | Bacteria | Bacteria | 152 | 7.169999999999998e-43 | NR | OQB85336.1 | 1852903 | g6185 | i0 | 81.1 | 8.93382352941176 | 90 | 17 | 99.3 | 0 | 3 | 272 | 207 | 296 | OQB85336.1 MAG: hypothetical protein BWX88_01984 [Planctomycetes bacterium ADurb.Bin126] | diamond | 2430 | 152 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetes bacterium ADurb.Bin126 | |||||
| 16213613 | 16213613 | PRJNA934332_P_NODE_1373_length_518_cov_1.164045_g1288_i0 | PRJNA934332 | 1373 | 518 | 1.164045 | 6.0297531 | Bacteria | 2 | Bacteria | Bacteria | 226 | 3.739999999999999e-68 | NR | MEZ5965807.1 | 2026780 | g1288 | i0 | 62.5 | 31.1525096525097 | 168 | 63 | 97.3 | 0 | 13 | 516 | 333 | 500 | MEZ5965807.1 phosphoenolpyruvate carboxykinase (ATP) [Planctomycetota bacterium] | diamond | 16137 | 228 | 0.991228070175439 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 18762294 | 18762294 | PRJNA934332_P_NODE_4635_length_307_cov_1.123932_g4548_i0 | PRJNA934332 | 4635 | 307 | 1.123932 | 3.45047124 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 307 | 5.540000000000001e-79 | NTclustered | gi|2063814025|emb|LR586051.1| | 2052164 | g4548 | i0 | 85.959 | 254.5667752443 | 292 | 35 | 94 | 5 | 20 | 307 | 320228 | 319939 | Gemmata bacterium CJuql4 whole genome assembly and annotation | blastn | 78152 | 307 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 20381755 | 20381755 | PRJNA934332_P_NODE_8356_length_249_cov_0.875000_g8269_i0 | PRJNA934332 | 8356 | 249 | 0.875 | 2.17875 | Gemmata | 113 | Bacteria | Bacteria | 174 | 4.61e-39 | NTclustered | gi|1727537522|gb|CP042911.1| | 114 | g8269 | i0 | 85.714 | 6.42971887550201 | 168 | 21 | 66 | 3 | 1 | 165 | 2867724 | 2867891 | Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome | blastn | 1601 | 174 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 21657711 | 21657711 | PRJNA934332_P_NODE_657_length_739_cov_1.229730_g579_i0 | PRJNA934332 | 657 | 739 | 1.22973 | 9.0877047 | Schlesneria | 656899 | Bacteria | Bacteria | 824 | 0 | NTclustered | gi|12583970|gb|AF245374.1|AF245374 | 149589 | g579 | i0 | 87.243 | 100.109607577808 | 729 | 83 | 98 | 8 | 17 | 739 | 865 | 1589 | Planctomycete str. 639 23S ribosomal RNA gene, partial sequence | blastn | 73981 | 828 | 0.995169082125604 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | planctomycete str. 639 | ||
| 25482000 | 25482000 | PRJNA934332_P_NODE_6380_length_271_cov_0.813131_g6293_i0 | PRJNA934332 | 6380 | 271 | 0.813131 | 2.20358501 | Gemmata | 113 | Bacteria | Bacteria | 405 | 1.66e-108 | NTclustered | gi|1804905141|emb|LR593886.1| | 1210884 | g6293 | i0 | 93.796 | 171.09963099631 | 274 | 10 | 100 | 7 | 1 | 271 | 3634041 | 3634310 | Gemmata massiliana isolate Soil9 genome assembly, chromosome: 1 | blastn | 46368 | 405 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata massiliana | |
| 27341205 | 27341205 | PRJNA934332_P_NODE_8643_length_248_cov_0.880000_g8556_i0 | PRJNA934332 | 8643 | 248 | 0.88 | 2.1824 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 155 | 7.029999999999998e-43 | NR | HLO40388.1 | 2052180 | g8556 | i0 | 89 | 1.98387096774194 | 82 | 9 | 99.2 | 0 | 1 | 246 | 371 | 452 | HLO40388.1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase [Phycisphaerales bacterium] | diamond | 492 | 155 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 28130580 | 28130580 | PRJNA934332_P_NODE_7385_length_252_cov_1.569832_g7298_i0 | PRJNA934332 | 7385 | 252 | 1.569832 | 3.95597664 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 96.7 | 4.569999999999999e-23 | NR | MDA0657687.1 | 2026780 | g7298 | i0 | 51.9 | 0.916666666666667 | 77 | 37 | 91.7 | 0 | 15 | 245 | 80 | 156 | MDA0657687.1 YcxB family protein [Planctomycetota bacterium] | diamond | 231 | 96.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28224935 | 28224935 | PRJNA934332_P_NODE_9566_length_246_cov_0.890173_g9479_i0 | PRJNA934332 | 9566 | 246 | 0.890173 | 2.18982558 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 75.9 | 8.4e-14 | NR | HMN42288.1 | 2052180 | g9479 | i0 | 53.5 | 0.865853658536585 | 71 | 30 | 86.6 | 2 | 244 | 32 | 1394 | 1461 | HMN42288.1 GC-type dockerin domain-anchored protein [Phycisphaerales bacterium] | diamond | 213 | 75.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 29487935 | 29487935 | PRJNA934332_P_NODE_70_length_1924_cov_1.881686_g59_i0 | PRJNA934332 | 70 | 1924 | 1.881686 | 36.20363864 | Phycisphaerae bacterium | 2026778 | Bacteria | Bacteria | 61.6 | 1.32e-5 | NR | MFQ5590864.1 | 2026778 | g59 | i0 | 40.8 | 0.297817047817048 | 71 | 38 | 10.4 | 3 | 1923 | 1723 | 743 | 813 | MFQ5590864.1 Ig-like domain-containing protein [Phycisphaerae bacterium] | diamond | 573 | 61.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 29930390 | 29930390 | PRJNA934332_P_NODE_2031_length_430_cov_2.156863_g1944_i0 | PRJNA934332 | 2031 | 430 | 2.156863 | 9.2745109 | Phycisphaerae bacterium | 2026778 | Bacteria | Bacteria | 55.1 | 1.35e-5 | NR | NIS52014.1 | 2026778 | g1944 | i0 | 53.2 | 0.327906976744186 | 47 | 21 | 32.1 | 1 | 2 | 139 | 486 | 532 | NIS52014.1 hypothetical protein [Phycisphaerae bacterium] | diamond | 141 | 55.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 30404552 | 30404552 | PRJNA934332_P_NODE_553_length_798_cov_2.270345_g481_i0 | PRJNA934332 | 553 | 798 | 2.270345 | 18.1173531 | Phycisphaerae bacterium | 2026778 | Bacteria | Bacteria | 59.7 | 4.69e-6 | NR | HWL93036.1 | 2026778 | g481 | i0 | 39.2 | 0.278195488721804 | 74 | 43 | 27.8 | 1 | 93 | 314 | 71 | 142 | HWL93036.1 hypothetical protein [Phycisphaerae bacterium] | diamond | 222 | 59.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerae bacterium | ||||
| 30846485 | 30846485 | PRJNA934332_P_NODE_9534_length_246_cov_0.890173_g9447_i0 | PRJNA934332 | 9534 | 246 | 0.890173 | 2.18982558 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 43.1 | 0.027 | NR | MEO0514600.1 | 2026780 | g9447 | i0 | 31.1 | 1.74390243902439 | 74 | 50 | 89 | 1 | 244 | 26 | 319 | 392 | MEO0514600.1 response regulator [Planctomycetota bacterium] | diamond | 429 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 32238211 | 32238211 | PRJNA934332_P_NODE_9898_length_245_cov_0.895349_g9811_i0 | PRJNA934332 | 9898 | 245 | 0.895349 | 2.19360505 | Candidatus Brocadiia bacterium | 2517210 | Bacteria | Bacteria | 46.6 | 0.00164 | NR | NUM34221.1 | 2517210 | g9811 | i0 | 40.7 | 0.661224489795918 | 54 | 32 | 66.1 | 0 | 79 | 240 | 392 | 445 | NUM34221.1 hypothetical protein [Candidatus Brocadiia bacterium] | diamond | 162 | 46.6 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Candidatus Brocadiia | Candidatus Brocadiia bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;