RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where bioproject = "PRJNA934332", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 12 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 12 ✖

bioproject 1

  • PRJNA934332 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3807451 3807451 PRJNA934332_P_NODE_2223_length_415_cov_1.315789_g2136_i0 PRJNA934332 2223 415 1.315789 5.46052435 Nematostella vectensis 45351 Cnidaria other_Eukaryota 241 4.75e-78   NR EDO25965.1 45351 g2136 i0 90.7 1.01204819277108 140 11 99.8 1 1 414 2 141 EDO25965.1 predicted protein, partial [Nematostella vectensis] diamond 420 241 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis
7288751 7288751 PRJNA934332_P_NODE_5366_length_288_cov_1.432558_g5279_i0 PRJNA934332 5366 288 1.432558 4.12576704 Dendronephthya gigantea 151771 Cnidaria other_Eukaryota 95.1 2.48e-20   NR XP_028419019.1 151771 g5279 i0 55.8 4.94791666666667 95 39 99 2 3 287 71 162 XP_028419019.1 ABC transporter G family member 9-like [Dendronephthya gigantea] diamond 1425 95.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea
9838585 9838585 PRJNA934332_P_NODE_2888_length_372_cov_2.060201_g2801_i0 PRJNA934332 2888 372 2.060201 7.66394772 Nematostella vectensis 45351 Cnidaria other_Eukaryota 117 2.6e-31   NR EDO33935.1 45351 g2801 i0 61.5 0.983870967741935 122 36 98.4 1 5 370 3 113 EDO33935.1 predicted protein [Nematostella vectensis] diamond 366 117 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis
12389760 12389760 PRJNA934332_P_NODE_3190_length_357_cov_1.355634_g3103_i0 PRJNA934332 3190 357 1.355634 4.83961338 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 176 6.33e-51   NR XP_028395166.1 151771 g3103 i0 73.2 12.2689075630252 112 30 94.1 0 14 349 1 112 XP_028395166.1 60S ribosomal protein L3-like [Dendronephthya gigantea] diamond 4380 177 0.994350282485876 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea
12389767 12389767 PRJNA934332_P_NODE_4310_length_317_cov_0.946721_g4223_i0 PRJNA934332 4310 317 0.946721 3.00110557 Xenia sp. Carnegie-2017 2897299 Cnidaria other_Eukaryota 54.7 0.008   NTclustered gi|2202608321|ref|XM_046984190.1| 2897299 g4223 i0 96.875 0.100946372239748 32 1 10 0 176 207 1373 1404 PREDICTED: Xenia sp. Carnegie-2017 uncharacterized LOC124434301 (LOC124434301), mRNA blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
15283342 15283342 PRJNA934332_P_NODE_5372_length_288_cov_1.395349_g5285_i0 PRJNA934332 5372 288 1.395349 4.01860512 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 58.4 5.73e-4   NTclustered gi|2917940693|emb|OZ237556.1| 6108 g5285 i0 100 26.7152777777778 31 0 11 0 258 288 14210844 14210874 Anemonia sulcata genome assembly, chromosome: 2 blastn 7694 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
22587596 22587596 PRJNA934332_P_NODE_4938_length_298_cov_1.604444_g4851_i0 PRJNA934332 4938 298 1.604444 4.78124312 Nematostella vectensis 45351 Cnidaria other_Eukaryota 87 1.91e-17   NR XP_032238636.1 45351 g4851 i0 48.5 8.78859060402685 97 45 97.7 2 293 3 39 130 XP_032238636.1 ABC transporter G family member 21 [Nematostella vectensis] diamond 2619 87 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis
24206984 24206984 PRJNA934332_P_NODE_3099_length_361_cov_2.302083_g3012_i0 PRJNA934332 3099 361 2.302083 8.31051963 Acropora digitifera 70779 Cnidaria other_Eukaryota 175 3.67e-48   NR XP_015759296.1 70779 g3012 i0 73.3 9.6398891966759 116 30 96.4 1 12 359 1 115 XP_015759296.1 PREDICTED: elongation factor 2-like [Acropora digitifera] diamond 3480 175 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora digitifera
26771787 26771787 PRJNA934332_P_NODE_4241_length_319_cov_1.252033_g4154_i0 PRJNA934332 4241 319 1.252033 3.99398527 Stylophora pistillata 50429 Cnidaria other_Eukaryota 65.1 4e-10   NR XP_022784565.1 50429 g4154 i0 39.3 4.12852664576802 89 52 81.8 1 264 4 119 207 XP_022784565.1 glutathione S-transferase Mu 3-like isoform X1 [Stylophora pistillata] diamond 1317 65.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata
27499063 27499063 PRJNA934332_P_NODE_4923_length_299_cov_1.022124_g4836_i0 PRJNA934332 4923 299 1.022124 3.05615076 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 70.9 9.59e-12   NR XP_057307358.1 13093 g4836 i0 36.5 1.04347826086957 104 60 98.3 2 297 4 469 572 XP_057307358.1 PC3-like endoprotease variant B [Hydractinia symbiolongicarpus] diamond 312 70.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
28888125 28888125 PRJNA934332_P_NODE_10488_length_243_cov_0.905882_g10401_i0 PRJNA934332 10488 243 0.905882 2.20129326 Xenia sp. Carnegie-2 86540 Cnidaria other_Eukaryota 48.1 4.72e-4   NR XP_046839094.1 2897299 g10401 i0 44.4 0.555555555555556 45 25 55.6 0 235 101 1020 1064 XP_046839094.1 LOW QUALITY PROTEIN: uncharacterized protein LOC124433378 [Xenia sp. Carnegie-2017] diamond 135 48.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
28888130 28888130 PRJNA934332_P_NODE_7828_length_250_cov_1.305085_g7741_i0 PRJNA934332 7828 250 1.305085 3.2627125 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 45.8 0.00334   NR ALG02156.1 499914 g7741 i0 34.9 1.992 83 53 98.4 1 250 5 148 230 ALG02156.1 MAC/Perforin domain containing protein [Rhopilema esculentum] diamond 498 45.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;