RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA934332", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 3 ✖

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA934332 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29046184 29046184 PRJNA934332_P_NODE_48_length_2249_cov_2.131434_g39_i0 PRJNA934332 48 2249 2.131434 47.93595066 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 192 1.4299999999999999e-47   NR GKT36102.1 2918883 g39 i0 24.2 1.00711427301023 755 409 97 19 1 2181 175 794 GKT36102.1 Transposon Tf2-8 polyprotein [Aduncisulcus paluster] diamond 2265 192 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
29772118 29772118 PRJNA934332_P_NODE_351_length_981_cov_2.162996_g292_i0 PRJNA934332 351 981 2.162996 21.21899076 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 132 3.8199999999999995e-30   NR GKT31717.1 2918883 g292 i0 31.7 1.7217125382263 281 177 85.3 4 135 971 507 774 GKT31717.1 hypothetical protein ADUPG1_006087, partial [Aduncisulcus paluster] diamond 1689 132 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
30032095 30032095 PRJNA934332_P_NODE_4111_length_323_cov_1.408000_g4024_i0 PRJNA934332 4111 323 1.408 4.54784 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.4 4.02e-5   NR XP_067766864.1 348837 g4024 i0 42.3 6.06501547987616 52 30 48.3 0 167 322 440 491 XP_067766864.1 Cysteine-rich membrane protein 2 [Spironucleus salmonicida] diamond 1959 52.4 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;