RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA931595" and tax_phylum = "Vulcanimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA931595 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14937604 14937604 PRJNA931595_P_NODE_1992_length_490_cov_2.345324_g1885_i0 PRJNA931595 1992 490 2.345324 11.4920876 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 717 0   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g1885 i0 93.075 739.15306122449 491 32 100 2 1 490 5033757 5033268 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 362185 717 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
30530390 30530390 PRJNA931595_P_NODE_5473_length_337_cov_2.522727_g5364_i0 PRJNA931595 5473 337 2.522727 8.50158999 Candidatus Cybelea sp. 2952917 Bacteria Bacteria 45.4 0.0119   NR HLX25562.1 2952917 g5364 i0 44.9 0.43620178041543 49 26 42.7 1 237 94 357 405 HLX25562.1 peptide ABC transporter substrate-binding protein [Candidatus Cybelea sp.] diamond 147 45.4 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Cybelea Candidatus Cybelea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;