RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA931595", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 6 ✖

tax_kingdom 1

  • Bacillati · 6 ✖

bioproject 1

  • PRJNA931595 · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18761119 18761119 PRJNA931595_P_NODE_10815_length_265_cov_1.276042_g10706_i0 PRJNA931595 10815 265 1.276042 3.3815113 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 292 1.31e-74   NTclustered gi|2874253812|emb|OY969796.1| 1672391 g10706 i0 89.7 158.592452830189 233 19 88 5 34 265 3033987 3033759 MAG: uncultured Chloroflexia bacterium isolate MFD01872.bin.1.103 genome assembly, chromosome: 1 blastn 42027 292 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
26930051 26930051 PRJNA931595_P_NODE_15662_length_240_cov_4.137725_g15553_i0 PRJNA931595 15662 240 4.137725 9.93054 Chloroflexota bacterium 2026724 Bacteria Bacteria 42.4 0.0466   NR RLT44601.1 2026724 g15553 i0 45.5 0.6875 55 27 65 1 54 209 69 123 RLT44601.1 MAG: alcohol dehydrogenase [Chloroflexota bacterium] diamond 165 42.4 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27877833 27877833 PRJNA931595_P_NODE_15765_length_236_cov_3.662577_g15656_i0 PRJNA931595 15765 236 3.662577 8.64368172 Chloroflexia bacterium 2448782 Bacteria Bacteria 42 0.0434   NR HEX6608996.1 2448782 g15656 i0 53.3 0.38135593220339 30 14 38.1 0 143 232 1 30 HEX6608996.1 YetF domain-containing protein [Chloroflexia bacterium] diamond 90 42 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
28983166 28983166 PRJNA931595_P_NODE_1928_length_496_cov_1.274232_g1821_i0 PRJNA931595 1928 496 1.274232 6.32019072 Anaerolineales bacterium 2073117 Bacteria Bacteria 45.8 0.0316   NR HJW91893.1 2073117 g1821 i0 38 0.429435483870968 71 39 42.9 1 472 260 4 69 HJW91893.1 multicopper oxidase domain-containing protein [Anaerolineales bacterium] diamond 213 45.8 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
29014802 29014802 PRJNA931595_P_NODE_15748_length_237_cov_2.554878_g15639_i0 PRJNA931595 15748 237 2.554878 6.05506086 Anaerolineae bacterium 2052143 Bacteria Bacteria 42.4 0.0418   NR HRU95628.1 2052143 g15639 i0 46.2 0.493670886075949 39 21 49.4 0 141 25 4 42 HRU95628.1 LysM peptidoglycan-binding domain-containing protein [Anaerolineae bacterium] diamond 117 42.4 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
29867046 29867046 PRJNA931595_P_NODE_14951_length_243_cov_0.905882_g14842_i0 PRJNA931595 14951 243 0.905882 2.20129326 Promineifilum sp. 2664178 Bacteria Bacteria 155 1.28e-42   NR WP_343400216.1 2664178 g14842 i0 90 2.96296296296296 80 8 98.8 0 242 3 343 422 WP_343400216.1 M1 family metallopeptidase [Promineifilum sp.] diamond 720 155 1 Bacteria   Bacillati Chloroflexota Ardenticatenia Candidatus Promineifilales Candidatus Promineifilaceae Candidatus Promineifilum Promineifilum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;