RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA931595", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA931595 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8562797 8562797 PRJNA931595_P_NODE_8347_length_287_cov_1.233645_g8238_i0 PRJNA931595 8347 287 1.233645 3.54056115 Hrabeiella periglandulata 152469 Annelida Annelida 71.3 7.33e-8   NTclustered gi|38154530|gb|AY364867.1| 152469 g8238 i0 88.136 17.3554006968641 59 7 21 0 196 254 2015 2073 Hrabeiella periglandulata 28S ribosomal RNA gene, partial sequence blastn 4981 71.3 1 Eukaryota Opisthokonta Metazoa Annelida       Hrabeiella Hrabeiella periglandulata
28642818 28642818 PRJNA931595_P_NODE_13807_length_246_cov_1.398844_g13698_i0 PRJNA931595 13807 246 1.398844 3.44115624 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 114 1.89e-27   NR KAK2143025.1 53620 g13698 i0 64.5 23.9634146341463 76 27 92.7 0 2 229 402 477 KAK2143025.1 hypothetical protein LSH36_886g00041 [Paralvinella palmiformis] diamond 5895 114 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
29077780 29077780 PRJNA931595_P_NODE_9348_length_278_cov_1.502439_g9239_i0 PRJNA931595 9348 278 1.502439 4.17678042 Owenia fusiformis 6347 Annelida Annelida 59.7 4.94e-8   NR CAH1796391.1 6347 g9239 i0 45.9 0.658273381294964 61 32 64.7 1 277 98 235 295 CAH1796391.1 unnamed protein product, partial [Owenia fusiformis] diamond 183 59.7 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;