RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA930380", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 3 ✖

tax_phylum 1

  • Acidobacteriota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA930380 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27783276 27783276 PRJNA930380_P_NODE_9844_length_272_cov_1.201005_g9791_i0 PRJNA930380 9844 272 1.201005 3.2667336 Candidatus Acidiferrales bacterium 2952895 Bacteria Bacteria 43.1 0.0381   NR HTQ52256.1 2952895 g9791 i0 46.3 0.452205882352941 41 21 45.2 1 225 103 137 176 HTQ52256.1 glycosyltransferase family 39 protein [Candidatus Acidiferrales bacterium] diamond 123 43.1 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales     Candidatus Acidiferrales bacterium
29614054 29614054 PRJNA930380_P_NODE_7790_length_283_cov_1.947619_g7737_i0 PRJNA930380 7790 283 1.947619 5.51176177 Candidatus Angelobacter sp. 2976921 Bacteria Bacteria 43.1 0.0139   NR HLJ26427.1 2976921 g7737 i0 50 0.46643109540636 44 19 46.6 1 167 36 80 120 HLJ26427.1 hypothetical protein [Candidatus Angelobacter sp.] diamond 132 43.1 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia     Candidatus Angelobacter Candidatus Angelobacter sp.
31763276 31763276 PRJNA930380_P_NODE_3997_length_325_cov_1.222222_g3944_i0 PRJNA930380 3997 325 1.222222 3.9722215 Acidobacteriota bacterium 1978231 Bacteria Bacteria 44.7 0.0191   NR MCB1054377.1 1978231 g3944 i0 33.9 1.23692307692308 62 41 57.2 0 38 223 279 340 MCB1054377.1 quinol:cytochrome C oxidoreductase [Acidobacteriota bacterium] diamond 402 44.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;