RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA930380", tax_kingdom = "Fungi" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA930380 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28667321 28667321 PRJNA930380_P_NODE_3207_length_358_cov_1.080702_g3154_i0 PRJNA930380 3207 358 1.080702 3.86891316 Olpidium bornovanus 278681 Fungi Fungi 143 1.29e-41   NR KAG5463140.1 278681 g3154 i0 69 0.837988826815642 100 31 83.8 0 58 357 2 101 KAG5463140.1 MAG: hypothetical protein BJ554DRAFT_1522 [Olpidium bornovanus] diamond 300 143 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
30151079 30151079 PRJNA930380_P_NODE_12432_length_248_cov_0.880000_g12379_i0 PRJNA930380 12432 248 0.88 2.1824 Olpidium bornovanus 278681 Fungi Fungi 143 1.18e-40   NR KAG5457578.1 278681 g12379 i0 68.4 1.18548387096774 98 15 99.2 1 2 247 101 198 KAG5457578.1 MAG: Threonyl/alanyl tRNA synthetase [Olpidium bornovanus] diamond 294 143 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;