contig_metadata
19 rows where bioproject = "PRJNA929952" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2530475 | 2530475 | PRJNA929952_P_NODE_2782_length_733_cov_4.593750_g642_i3 | PRJNA929952 | 2782 | 733 | 4.59375 | 33.6721875 | Opitutaceae | 134623 | Bacteria | Bacteria | 800 | 0 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g642 | i3 | 91.216 | 86.4679399727149 | 592 | 46 | 99 | 5 | 1 | 587 | 2834443 | 2833853 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 63381 | 800 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 7287246 | 7287246 | PRJNA929952_P_NODE_2006_length_838_cov_25.721879_g106_i3 | PRJNA929952 | 2006 | 838 | 25.721879 | 215.54934602 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 1040 | 0 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g106 | i3 | 94.041 | 112.965393794749 | 688 | 38 | 82 | 3 | 1 | 686 | 1315688 | 1316374 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 94665 | 1040 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 7287249 | 7287249 | PRJNA929952_P_NODE_2086_length_823_cov_5.200252_g642_i1 | PRJNA929952 | 2086 | 823 | 5.200252 | 42.79807396 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 998 | 0 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g642 | i1 | 94.844 | 84.0315917375456 | 640 | 31 | 94 | 2 | 182 | 821 | 3557383 | 3556746 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 69158 | 998 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 8562079 | 8562079 | PRJNA929952_P_NODE_15287_length_263_cov_3.529915_g13993_i0 | PRJNA929952 | 15287 | 263 | 3.529915 | 9.28367645 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 263 | 1.02e-65 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g13993 | i0 | 83.083 | 10.8250950570342 | 266 | 42 | 100 | 1 | 1 | 263 | 835 | 1100 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 2847 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 8562108 | 8562108 | PRJNA929952_P_NODE_5927_length_508_cov_5.670146_g4822_i0 | PRJNA929952 | 5927 | 508 | 5.670146 | 28.80434168 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 702 | 0 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g4822 | i0 | 99.482 | 60.9251968503937 | 386 | 2 | 76 | 0 | 1 | 386 | 3555593 | 3555978 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 30950 | 702 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 9837154 | 9837154 | PRJNA929952_P_NODE_22868_length_170_cov_2.510638_g21574_i0 | PRJNA929952 | 22868 | 170 | 2.510638 | 4.2680846 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 161 | 2.26e-35 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g21574 | i0 | 85.443 | 0.929411764705882 | 158 | 19 | 91 | 4 | 16 | 170 | 1729067 | 1729223 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 158 | 161 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 10183487 | 10183487 | PRJNA929952_P_NODE_20928_length_195_cov_3.632530_g19634_i0 | PRJNA929952 | 20928 | 195 | 3.63253 | 7.0834335 | Opitutaceae | 134623 | Bacteria | Bacteria | 257 | 3.33e-64 | NTclustered | gi|1243404978|gb|CP023344.1| | 2576891 | g19634 | i0 | 91.053 | 64.2717948717949 | 190 | 17 | 97 | 0 | 6 | 195 | 2498456 | 2498645 | Nibricoccus aquaticus strain HZ-65 chromosome, complete genome | blastn | 12533 | 257 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus aquaticus | |
| 11112779 | 11112779 | PRJNA929952_P_NODE_15349_length_262_cov_8.613734_g14055_i0 | PRJNA929952 | 15349 | 262 | 8.613734 | 22.56798308 | uncultured Opitutia bacterium | 575426 | Bacteria | Bacteria | 390 | 4.4599999999999996e-104 | NTclustered | gi|451919372|gb|KC453236.1| | 575426 | g14055 | i0 | 94.821 | 94.8778625954198 | 251 | 11 | 95 | 2 | 1 | 250 | 250 | 1 | Uncultured Opitutae bacterium clone RLBp5626 16S ribosomal RNA gene, partial sequence | blastn | 24858 | 390 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | uncultured Opitutia bacterium | ||||
| 12388291 | 12388291 | PRJNA929952_P_NODE_10210_length_361_cov_1.701807_g8927_i0 | PRJNA929952 | 10210 | 361 | 1.701807 | 6.14352327 | Verrucomicrobia bacterium IMCC26134 | 1637999 | Bacteria | Bacteria | 117 | 1.2e-21 | NTclustered | gi|807238858|gb|CP011265.1| | 1637999 | g8927 | i0 | 89.247 | 15.4349030470914 | 93 | 10 | 26 | 0 | 160 | 252 | 1904166 | 1904258 | Verrucomicrobia bacterium IMCC26134, complete genome | blastn | 5572 | 117 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobia bacterium IMCC26134 | |||||
| 12388349 | 12388349 | PRJNA929952_P_NODE_910_length_1155_cov_4.797513_g642_i0 | PRJNA929952 | 910 | 1155 | 4.797513 | 55.41127515 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 1587 | 0 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g642 | i0 | 95.134 | 84.4112554112554 | 1007 | 47 | 99 | 2 | 147 | 1153 | 3557333 | 3556329 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 97495 | 1587 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 13662799 | 13662799 | PRJNA929952_P_NODE_2691_length_742_cov_577.830295_g1994_i0 | PRJNA929952 | 2691 | 742 | 577.830295 | 4287.5007889 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 767 | 0 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g1994 | i0 | 92.265 | 192.764150943396 | 543 | 38 | 73 | 4 | 200 | 742 | 1316810 | 1317348 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 143031 | 767 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 13662803 | 13662803 | PRJNA929952_P_NODE_3871_length_634_cov_27.224793_g2976_i0 | PRJNA929952 | 3871 | 634 | 27.224793 | 172.60518762 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 628 | 2.2899999999999998e-175 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g2976 | i0 | 89.442 | 99.7649842271293 | 502 | 48 | 95 | 3 | 134 | 634 | 1315425 | 1314928 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 63251 | 628 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 14937138 | 14937138 | PRJNA929952_P_NODE_8052_length_424_cov_10.275949_g6803_i0 | PRJNA929952 | 8052 | 424 | 10.275949 | 43.57002376 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 723 | 0 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g6803 | i0 | 97.406 | 281.801886792453 | 424 | 11 | 100 | 0 | 1 | 424 | 1995 | 2418 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 119484 | 723 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 18760783 | 18760783 | PRJNA929952_P_NODE_23635_length_161_cov_3.946970_g22341_i0 | PRJNA929952 | 23635 | 161 | 3.94697 | 6.3546217 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 226 | 7.449999999999999e-55 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g22341 | i0 | 91.925 | 69.583850931677 | 161 | 13 | 100 | 0 | 1 | 161 | 5153843 | 5154003 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 11203 | 226 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 18760788 | 18760788 | PRJNA929952_P_NODE_3515_length_664_cov_13.144882_g2681_i0 | PRJNA929952 | 3515 | 664 | 13.144882 | 87.28201648 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 1090 | 0 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g2681 | i0 | 96.784 | 277.263554216867 | 653 | 21 | 98 | 0 | 12 | 664 | 1171 | 519 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 184103 | 1090 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 19106222 | 19106222 | PRJNA929952_P_NODE_2115_length_818_cov_4.519645_g642_i2 | PRJNA929952 | 2115 | 818 | 4.519645 | 36.9706961 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 841 | 0 | NTclustered | gi|470483113|ref|NR_076574.1| | 107709 | g642 | i2 | 90.484 | 82.1295843520782 | 641 | 56 | 93 | 4 | 182 | 818 | 652 | 1291 | Opitutus terrae strain PB90-1 23S ribosomal RNA gene, complete sequence | blastn | 67182 | 843 | 0.997627520759193 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus terrae | |
| 20035756 | 20035756 | PRJNA929952_P_NODE_13996_length_281_cov_4.130952_g12703_i0 | PRJNA929952 | 13996 | 281 | 4.130952 | 11.60797512 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 274 | 5.08e-69 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g12703 | i0 | 84.342 | 215.772241992883 | 281 | 42 | 99 | 2 | 3 | 281 | 2853 | 2573 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 60632 | 274 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 21311223 | 21311223 | PRJNA929952_P_NODE_11717_length_324_cov_13.450847_g1809_i1 | PRJNA929952 | 11717 | 324 | 13.450847 | 43.58074428 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 483 | 9.11e-132 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g1809 | i1 | 93.538 | 47.7592592592593 | 325 | 19 | 100 | 2 | 1 | 324 | 184 | 507 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 15474 | 483 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 22586154 | 22586154 | PRJNA929952_P_NODE_2458_length_769_cov_7.320270_g1809_i0 | PRJNA929952 | 2458 | 769 | 7.32027 | 56.2928763 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 621 | 4.689999999999999e-173 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g1809 | i0 | 93.541 | 69.7087126137841 | 418 | 25 | 95 | 2 | 353 | 769 | 3557639 | 3558055 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 53606 | 621 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;