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contig_metadata

13 rows where bioproject = "PRJNA929952", tax_phylum = "Discosea" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 13 ✖

tax_phylum 1

  • Discosea · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA929952 · 13 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3460040 3460040 PRJNA929952_P_NODE_20023_length_210_cov_2.872928_g18729_i0 PRJNA929952 20023 210 2.872928 6.0331488 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 220 4.77e-53   NTclustered gi|575488798|gb|KF772979.1| 180228 g18729 i0 88.462 69.6190476190476 182 21 87 0 1 182 191 10 Paramoeba pemaquidensis strain PA027 beta actin mRNA, partial cds blastn 14620 220 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
4737496 4737496 PRJNA929952_P_NODE_11344_length_332_cov_8.696370_g10054_i0 PRJNA929952 11344 332 8.69637 28.8719484 Ripella platypodia 2047821 Discosea other_Eukaryota 300 1.01e-76   NTclustered gi|1269228347|gb|MF683472.1| 2047821 g10054 i0 85.079 94.8403614457831 315 24 90 17 1 300 392 86 Ripella platypodia clone 21701 18S ribosomal RNA gene, partial sequence blastn 31487 300 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
6358813 6358813 PRJNA929952_P_NODE_15365_length_262_cov_3.536481_g14071_i0 PRJNA929952 15365 262 3.536481 9.26558022 Vannellidae 95227 Discosea other_Eukaryota 148 2.9599999999999996e-31   NTclustered gi|62865947|gb|AY929922.1| 325065 g14071 i0 86.429 43.587786259542 140 14 53 5 121 258 1375 1239 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 11420 148 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
7287244 7287244 PRJNA929952_P_NODE_17566_length_238_cov_15.669856_g16272_i0 PRJNA929952 17566 238 15.669856 37.29425728 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 226 1.1899999999999999e-54   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g16272 i0 83.936 75.3193277310924 249 26 99 7 2 238 33519 33273 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 17926 226 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
14937104 14937104 PRJNA929952_P_NODE_15692_length_258_cov_6.192140_g14398_i0 PRJNA929952 15692 258 6.19214 15.9757212 Paramoeba perurans 437603 Discosea other_Eukaryota 385 2.04e-102   NTclustered gi|145386781|gb|EF216906.1| 437603 g14398 i0 93.511 90.9263565891473 262 12 100 4 1 258 1438 1178 Neoparamoeba perurans strain GD-D1/1 28S large subunit ribosomal RNA gene, partial sequence blastn 23459 385 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba perurans
14937141 14937141 PRJNA929952_P_NODE_9112_length_391_cov_16.118785_g7841_i0 PRJNA929952 9112 391 16.118785 63.02444935 Paramoeba aparasomata 2583407 Discosea other_Eukaryota 361 5.47e-95   NTclustered gi|1767098935|gb|MK518072.1| 2583407 g7841 i0 83.619 20.9386189258312 409 41 100 17 1 391 15859 15459 Paramoeba aparasomata mitochondrion, complete genome blastn 8187 361 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba aparasomata
17487417 17487417 PRJNA929952_P_NODE_16254_length_252_cov_2.834081_g14960_i0 PRJNA929952 16254 252 2.834081 7.14188412 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 148 2.83e-31   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g14960 i0 92.381 37.7539682539683 105 7 42 1 1 105 1974 1871 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 9514 148 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
18760771 18760771 PRJNA929952_P_NODE_18735_length_227_cov_13.035354_g17441_i0 PRJNA929952 18735 227 13.035354 29.59025358 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 75 4.32e-9   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g17441 i0 94 1.31277533039648 50 2 22 1 52 100 967 918 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 298 75 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
22932645 22932645 PRJNA929952_P_NODE_598_length_1335_cov_17.248086_g403_i0 PRJNA929952 598 1335 17.248086 230.2619481 Paramoeba 200890 Discosea other_Eukaryota 634 1.0699999999999998e-176   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g403 i0 82.415 16.2164794007491 762 101 56 26 461 1205 42177 41432 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 21649 634 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
23861477 23861477 PRJNA929952_P_NODE_5839_length_513_cov_7.621901_g4740_i0 PRJNA929952 5839 513 7.621901 39.10035213 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 374 9.439999999999999e-99   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g4740 i0 83.493 123.502923976608 418 52 80 13 105 513 32368 32777 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 63357 374 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
24206402 24206402 PRJNA929952_P_NODE_24679_length_151_cov_4.688525_g23385_i0 PRJNA929952 24679 151 4.688525 7.07967275 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 110 7.21e-20   NTclustered gi|62865955|gb|AY929930.1| 325074 g23385 i0 91.358 54.4172185430464 81 6 53 1 53 132 305 225 Vannella sp. strain 4354/I internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 8217 110 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain 4354/I
25135308 25135308 PRJNA929952_P_NODE_22880_length_170_cov_2.347518_g21586_i0 PRJNA929952 22880 170 2.347518 3.9907806 Cochliopodium minus 313997 Discosea other_Eukaryota 187 3.74e-43   NTclustered gi|330902862|gb|JF298257.1| 313997 g21586 i0 90.196 9.3 153 1 82 1 1 139 404 252 Cochliopodium minus 18S ribosomal RNA gene, partial sequence blastn 1581 187 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
25135329 25135329 PRJNA929952_P_NODE_8520_length_408_cov_324.266491_g7261_i0 PRJNA929952 8520 408 324.266491 1323.00728328 Korotnevella jeppesenii 1678066 Discosea other_Eukaryota 702 0   NTclustered gi|861553759|gb|KP719186.1| 1678066 g7261 i0 98.734 56.968137254902 395 5 97 0 1 395 395 1 Korotnevella jeppesenii strain A4DVDPB clone 4 small subunit ribosomal RNA gene, partial sequence blastn 23243 702 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Korotnevella Korotnevella jeppesenii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;